Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AP001000.1-201ENST00000526843 742 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AP001317.1-201ENST00000531194 960 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 HNRNPA1P71-201ENST00000559135 950 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL133247.2-201ENST00000603236 482 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC100793.4-201ENST00000613683 429 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC063943.3-201ENST00000615562 356 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC005840.5-201ENST00000619166 599 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RBM12B-AS1-201ENST00000623283 653 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 EIF3EP1-201ENST00000433978 1316 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 GPI-202ENST00000415930 4000 ntTSL 2 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RC3H1Q5TC82 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC026310.1-201ENST00000396004 378 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL590143.1-201ENST00000405071 138 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 RPLP1P10-201ENST00000413972 339 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 OR51A5P-201ENST00000415429 942 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 ARL2BPP3-201ENST00000421226 480 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 EEF1A1P39-201ENST00000440791 250 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 MTND4LP16-201ENST00000440828 295 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 CDC27P1-201ENST00000445384 715 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 RPL31P58-201ENST00000469001 379 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 RPS14P7-201ENST00000473701 448 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 OR9N1P-202ENST00000494289 481 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 ARL4AP2-201ENST00000507378 601 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 KRT19P6-201ENST00000510983 209 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AP002963.1-201ENST00000530590 184 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AL121766.1-201ENST00000547436 487 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 LINC00556-201ENST00000569603 412 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 DHFRP1-201ENST00000579682 559 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC016405.2-201ENST00000607393 312 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC007684.1-201ENST00000609671 477 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 FP325313.1-201ENST00000638228 703 ntBASIC9.21□□□□□ -0.94
RC3H1Q5TC82 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
RC3H1Q5TC82 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms