Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 OR2M1P-201ENST00000318104 951 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC3.64□□□□□ -1.83
HSPG2P98160 TDGF1P1-201ENST00000445734 527 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC103987.1-201ENST00000473394 348 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC068587.1-201ENST00000483613 781 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC015864.1-201ENST00000496512 544 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 BNIP3P1-201ENST00000547295 580 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC3.64□□□□□ -1.83
HSPG2P98160 AC004825.1-201ENST00000555068 586 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC3.64□□□□□ -1.83
HSPG2P98160 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 RNU4ATAC-201ENST00000580972 127 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC020910.2-201ENST00000603635 610 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 AP002370.1-201ENST00000528055 1602 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HSPG2P98160 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 FO082842.1-201ENST00000423552 1370 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 TEK-202ENST00000406359 3935 ntTSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 AC019185.1-201ENST00000442718 389 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 SNRPCP2-201ENST00000504370 475 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 RBM22P1-201ENST00000578589 1214 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 CTAGE11P-201ENST00000451540 2353 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 CHMP1B2P-201ENST00000399581 597 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 Z84478.1-201ENST00000438230 1219 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.64□□□□□ -1.83
HSPG2P98160 RN7SL354P-201ENST00000469282 294 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 BTF3P13-201ENST00000513224 490 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 IGBP1P1-201ENST00000554337 1009 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 AL590392.1-201ENST00000604960 446 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 AC245389.2-201ENST00000616023 576 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 AC242843.1-201ENST00000618702 573 ntBASIC3.64□□□□□ -1.83
HSPG2P98160 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HSPG2P98160 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HSPG2P98160 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HSPG2P98160 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC006335.2-201ENST00000437993 330 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC009237.1-201ENST00000442127 744 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC073594.1-201ENST00000462065 364 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC083795.1-201ENST00000491760 320 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC000068.2-201ENST00000608816 460 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms