Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RN7SKP185-201ENST00000362813 326 ntBASIC4.79□□□□□ -1.64
CCL20P78556 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 RNA5SP187-201ENST00000384400 119 ntBASIC4.79□□□□□ -1.64
CCL20P78556 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 LSM5-202ENST00000409292 538 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 AL663074.2-201ENST00000440621 479 ntBASIC4.79□□□□□ -1.64
CCL20P78556 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 CUBNP2-201ENST00000443534 1139 ntBASIC4.79□□□□□ -1.64
CCL20P78556 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.79□□□□□ -1.64
CCL20P78556 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 RN7SL492P-201ENST00000460700 295 ntBASIC4.79□□□□□ -1.64
CCL20P78556 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.79□□□□□ -1.64
CCL20P78556 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 AC010343.2-201ENST00000510162 224 ntBASIC4.79□□□□□ -1.64
CCL20P78556 AC090958.1-201ENST00000511122 351 ntBASIC4.79□□□□□ -1.64
CCL20P78556 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL20P78556 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.79□□□□□ -1.64
CCL20P78556 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 MIR6085-201ENST00000618314 110 ntBASIC4.79□□□□□ -1.64
CCL20P78556 AL137067.2-201ENST00000621202 131 ntBASIC4.79□□□□□ -1.64
CCL20P78556 SNX18P12-201ENST00000624821 759 ntBASIC4.79□□□□□ -1.64
CCL20P78556 AC005618.4-201ENST00000625053 554 ntBASIC4.79□□□□□ -1.64
CCL20P78556 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 SNORD16-201ENST00000362803 99 ntBASIC4.78□□□□□ -1.64
CCL20P78556 RN7SKP69-201ENST00000365390 305 ntBASIC4.78□□□□□ -1.64
CCL20P78556 RN7SKP268-201ENST00000411107 316 ntBASIC4.78□□□□□ -1.64
CCL20P78556 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL20P78556 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 AC079809.1-201ENST00000415468 276 ntBASIC4.78□□□□□ -1.64
CCL20P78556 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 RPL6P21-201ENST00000418672 846 ntBASIC4.78□□□□□ -1.64
CCL20P78556 ETF1P1-206ENST00000427296 984 ntBASIC4.78□□□□□ -1.64
CCL20P78556 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL20P78556 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 RPS23P9-201ENST00000448848 438 ntBASIC4.78□□□□□ -1.64
CCL20P78556 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL20P78556 SNORA35.1-201ENST00000458908 128 ntBASIC4.78□□□□□ -1.64
CCL20P78556 RN7SL197P-201ENST00000466981 299 ntBASIC4.78□□□□□ -1.64
CCL20P78556 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL20P78556 RPL7P17-201ENST00000470927 724 ntBASIC4.78□□□□□ -1.64
CCL20P78556 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC4.78□□□□□ -1.64
CCL20P78556 PDCL3P4-201ENST00000489621 720 ntBASIC4.78□□□□□ -1.64
CCL20P78556 RN7SL182P-201ENST00000496499 300 ntBASIC4.78□□□□□ -1.64
CCL20P78556 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.78□□□□□ -1.64
CCL20P78556 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 IGKV2D-38-201ENST00000518423 240 ntBASIC4.78□□□□□ -1.64
CCL20P78556 AC078899.1-201ENST00000521432 1185 ntBASIC4.78□□□□□ -1.64
CCL20P78556 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 AC092865.1-201ENST00000544395 1023 ntBASIC4.78□□□□□ -1.64
CCL20P78556 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.78□□□□□ -1.64
CCL20P78556 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL20P78556 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC4.78□□□□□ -1.64
CCL20P78556 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
CCL20P78556 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms