Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC024451.4-201ENST00000602578 752 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC007255.2-201ENST00000604053 631 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC092954.1-201ENST00000609121 445 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC021755.4-201ENST00000616620 456 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC019080.5-201ENST00000624891 757 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC083865.1-201ENST00000636634 831 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
CLRN1P58418 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 AP005139.1-201ENST00000580702 1647 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC009237.3-203ENST00000442128 3551 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CLRN1P58418 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
CLRN1P58418 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CLRN1P58418 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 AP002800.1-201ENST00000624982 2225 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 RNA5SP114-201ENST00000363780 113 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 RNU6-906P-201ENST00000384700 70 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CLRN1P58418 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 RPSAP60-201ENST00000415403 880 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 MTCO1P43-201ENST00000431831 488 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 BX119904.1-201ENST00000432026 348 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AC091390.2-201ENST00000432573 374 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 USP9YP24-201ENST00000434374 697 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 MYL6P3-201ENST00000436904 432 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 OR10R1P-201ENST00000441524 1141 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 SETD6P1-201ENST00000444575 317 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 USP9YP17-201ENST00000444617 696 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AL358794.1-201ENST00000445689 381 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 GAPDHP53-201ENST00000458397 924 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 NDUFA5P9-201ENST00000472609 340 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 AP000563.1-201ENST00000490865 758 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 RPL5P11-201ENST00000498068 893 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC117522.2-201ENST00000510049 657 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 MTCO3P28-201ENST00000513351 515 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 Vault.2-201ENST00000516519 98 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 OR10V3P-201ENST00000525712 725 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC006120.1-201ENST00000579375 546 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC011447.2-201ENST00000592921 283 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AC008536.1-201ENST00000602872 669 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AC122710.3-201ENST00000606566 541 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 AC008115.4-201ENST00000619780 775 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.16□□□□□ -1.42
CLRN1P58418 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.16□□□□□ -1.42
CLRN1P58418 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.16□□□□□ -1.42
CLRN1P58418 CASC19-274ENST00000642018 970 ntBASIC6.16□□□□□ -1.42
CLRN1P58418 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CLRN1P58418 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms