Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.88□□□□□ -1.31
NEK3P51956 AC016550.3-201ENST00000515706 767 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.88□□□□□ -1.31
NEK3P51956 SETP17-201ENST00000534163 817 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.88□□□□□ -1.31
NEK3P51956 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.88□□□□□ -1.31
NEK3P51956 OR4C49P-201ENST00000563891 900 ntBASIC6.88□□□□□ -1.31
NEK3P51956 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.88□□□□□ -1.31
NEK3P51956 AC005726.4-201ENST00000582858 458 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.88□□□□□ -1.31
NEK3P51956 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 RPL7AP69-201ENST00000595306 806 ntBASIC6.88□□□□□ -1.31
NEK3P51956 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 AC211486.4-201ENST00000621495 113 ntBASIC6.88□□□□□ -1.31
NEK3P51956 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 AC011504.1-201ENST00000623331 4103 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 AC025809.2-201ENST00000625085 1802 ntBASIC6.87□□□□□ -1.31
NEK3P51956 MAPK10-357ENST00000641831 2858 ntBASIC6.87□□□□□ -1.31
NEK3P51956 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NEK3P51956 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 AC096992.2-201ENST00000609553 1684 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.87□□□□□ -1.31
NEK3P51956 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 MKI67P1-201ENST00000604297 1460 ntBASIC6.87□□□□□ -1.31
NEK3P51956 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.87□□□□□ -1.31
NEK3P51956 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 Y_RNA.110-201ENST00000363220 99 ntBASIC6.87□□□□□ -1.31
NEK3P51956 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 AC019178.1-201ENST00000392337 440 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AL353626.3-201ENST00000413399 657 ntBASIC6.87□□□□□ -1.31
NEK3P51956 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.87□□□□□ -1.31
NEK3P51956 GAPDHP57-201ENST00000424400 585 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 RPS10P21-201ENST00000430654 475 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.87□□□□□ -1.31
NEK3P51956 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 AC074367.1-201ENST00000438685 1125 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AC064862.5-201ENST00000440618 334 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AL691517.1-201ENST00000440833 1235 ntBASIC6.87□□□□□ -1.31
NEK3P51956 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
NEK3P51956 AC083806.1-201ENST00000468934 316 ntBASIC6.87□□□□□ -1.31
NEK3P51956 RPS3AP49-201ENST00000472161 790 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AC117395.1-201ENST00000487390 403 ntBASIC6.87□□□□□ -1.31
NEK3P51956 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 AC021146.11-201ENST00000503319 491 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AC008628.1-201ENST00000508663 265 ntBASIC6.87□□□□□ -1.31
NEK3P51956 SNX18P23-201ENST00000510867 677 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.87□□□□□ -1.31
NEK3P51956 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.87□□□□□ -1.31
NEK3P51956 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.87□□□□□ -1.31
NEK3P51956 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.87□□□□□ -1.31
NEK3P51956 AL035410.2-201ENST00000604963 864 ntBASIC6.87□□□□□ -1.31
NEK3P51956 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 MIR6885-201ENST00000612241 66 ntBASIC6.87□□□□□ -1.31
NEK3P51956 AL109620.1-201ENST00000618738 1197 ntBASIC6.87□□□□□ -1.31
NEK3P51956 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NEK3P51956 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEK3P51956 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.87□□□□□ -1.31
NEK3P51956 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
NEK3P51956 TNPO1P2-201ENST00000426249 2665 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 AC073365.1-203ENST00000641055 1992 ntBASIC6.86□□□□□ -1.31
NEK3P51956 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 RPL10P10-201ENST00000403509 664 ntBASIC6.86□□□□□ -1.31
NEK3P51956 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.86□□□□□ -1.31
NEK3P51956 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms