Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CENPAP49450 RAB28P4-201ENST00000622233 665 ntBASIC6.02□□□□□ -1.45
CENPAP49450 AP000577.1-201ENST00000624366 878 ntBASIC6.02□□□□□ -1.45
CENPAP49450 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CENPAP49450 API5P1-201ENST00000424316 1510 ntBASIC6.02□□□□□ -1.45
CENPAP49450 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.02□□□□□ -1.45
CENPAP49450 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.02□□□□□ -1.45
CENPAP49450 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.02□□□□□ -1.45
CENPAP49450 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CENPAP49450 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
CENPAP49450 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CENPAP49450 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 AC024341.1-201ENST00000526444 1552 ntBASIC6.01□□□□□ -1.45
CENPAP49450 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 AL731532.1-201ENST00000623972 4236 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC011503.2-201ENST00000594230 1500 ntBASIC6.01□□□□□ -1.45
CENPAP49450 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CENPAP49450 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CENPAP49450 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 AL049697.3-201ENST00000406493 982 ntBASIC6.01□□□□□ -1.45
CENPAP49450 RN7SKP137-201ENST00000411074 307 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 AL353626.3-201ENST00000413399 657 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AL662791.3-201ENST00000413771 776 ntBASIC6.01□□□□□ -1.45
CENPAP49450 MTND4LP21-201ENST00000415303 295 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AL451136.1-201ENST00000435399 325 ntBASIC6.01□□□□□ -1.45
CENPAP49450 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.01□□□□□ -1.45
CENPAP49450 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 RN7SL492P-201ENST00000460700 295 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.01□□□□□ -1.45
CENPAP49450 PPP1R2P6-201ENST00000478565 588 ntBASIC6.01□□□□□ -1.45
CENPAP49450 RN7SL776P-201ENST00000493390 268 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.01□□□□□ -1.45
CENPAP49450 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 MTCYBP44-201ENST00000514835 823 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC104997.1-201ENST00000519761 717 ntBASIC6.01□□□□□ -1.45
CENPAP49450 IGHV3-57-201ENST00000520143 280 ntBASIC6.01□□□□□ -1.45
CENPAP49450 IGLV3-6-201ENST00000523937 250 ntBASIC6.01□□□□□ -1.45
CENPAP49450 OR4A42P-201ENST00000531397 938 ntBASIC6.01□□□□□ -1.45
CENPAP49450 PDCL3P1-201ENST00000534575 734 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.01□□□□□ -1.45
CENPAP49450 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.01□□□□□ -1.45
CENPAP49450 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
CENPAP49450 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.01□□□□□ -1.45
CENPAP49450 MTND2P13-201ENST00000577438 1039 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 MIR4428-201ENST00000584884 73 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 AL953862.2-201ENST00000603089 820 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC091193.1-201ENST00000604640 448 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AC092953.2-201ENST00000608000 699 ntBASIC6.01□□□□□ -1.45
CENPAP49450 OR7M1P-201ENST00000608946 533 ntBASIC6.01□□□□□ -1.45
CENPAP49450 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.01□□□□□ -1.45
CENPAP49450 AC018558.4-201ENST00000622153 281 ntBASIC6.01□□□□□ -1.45
CENPAP49450 AP002371.2-201ENST00000624450 503 ntBASIC6.01□□□□□ -1.45
CENPAP49450 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CENPAP49450 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CENPAP49450 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6□□□□□ -1.45
CENPAP49450 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6□□□□□ -1.45
CENPAP49450 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CENPAP49450 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6□□□□□ -1.45
CENPAP49450 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6□□□□□ -1.45
CENPAP49450 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6□□□□□ -1.45
CENPAP49450 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CENPAP49450 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CENPAP49450 STAG3L4-201ENST00000352103 530 ntBASIC6□□□□□ -1.45
CENPAP49450 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CENPAP49450 Y_RNA.110-201ENST00000363220 99 ntBASIC6□□□□□ -1.45
CENPAP49450 SNORA70.3-201ENST00000365075 132 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms