Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC003989.1-201ENST00000434569 565 ntBASIC6.83□□□□□ -1.32
SSR1P43307 AC083855.1-201ENST00000440041 258 ntBASIC6.83□□□□□ -1.32
SSR1P43307 VN1R38P-201ENST00000450265 887 ntBASIC6.83□□□□□ -1.32
SSR1P43307 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.83□□□□□ -1.32
SSR1P43307 AL133480.2-201ENST00000456723 487 ntBASIC6.83□□□□□ -1.32
SSR1P43307 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 IGHV1-14-201ENST00000523391 241 ntBASIC6.83□□□□□ -1.32
SSR1P43307 KCTD9P4-201ENST00000526766 1166 ntBASIC6.83□□□□□ -1.32
SSR1P43307 AP001804.1-201ENST00000526868 919 ntBASIC6.83□□□□□ -1.32
SSR1P43307 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.83□□□□□ -1.32
SSR1P43307 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.83□□□□□ -1.32
SSR1P43307 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 AP001885.1-201ENST00000621658 558 ntBASIC6.83□□□□□ -1.32
SSR1P43307 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.83□□□□□ -1.32
SSR1P43307 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.83□□□□□ -1.32
SSR1P43307 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 AL591135.1-201ENST00000401578 5914 ntBASIC6.83□□□□□ -1.32
SSR1P43307 MRRFP1-201ENST00000435941 1675 ntBASIC6.83□□□□□ -1.32
SSR1P43307 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSR1P43307 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSR1P43307 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.83□□□□□ -1.32
SSR1P43307 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.83□□□□□ -1.32
SSR1P43307 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.83□□□□□ -1.32
SSR1P43307 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSR1P43307 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.82□□□□□ -1.32
SSR1P43307 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.82□□□□□ -1.32
SSR1P43307 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.82□□□□□ -1.32
SSR1P43307 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.82□□□□□ -1.32
SSR1P43307 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 NPM1P14-201ENST00000343743 866 ntBASIC6.82□□□□□ -1.32
SSR1P43307 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SSR1P43307 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SSR1P43307 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 RNA5SP231-201ENST00000410496 138 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.82□□□□□ -1.32
SSR1P43307 BMS1P11-201ENST00000442351 885 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AL355355.1-201ENST00000442900 793 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AL121578.2-201ENST00000448797 447 ntBASIC6.82□□□□□ -1.32
SSR1P43307 SEPT7P3-201ENST00000455017 621 ntBASIC6.82□□□□□ -1.32
SSR1P43307 EIF3LP2-201ENST00000457262 807 ntBASIC6.82□□□□□ -1.32
SSR1P43307 BMS1P9-201ENST00000457640 885 ntBASIC6.82□□□□□ -1.32
SSR1P43307 RPL5P14-201ENST00000494197 878 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.82□□□□□ -1.32
SSR1P43307 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.82□□□□□ -1.32
SSR1P43307 AC130366.1-201ENST00000526505 1192 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.82□□□□□ -1.32
SSR1P43307 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.82□□□□□ -1.32
SSR1P43307 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.82□□□□□ -1.32
SSR1P43307 MIR378H-201ENST00000579966 83 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AC100832.2-201ENST00000582080 776 ntBASIC6.82□□□□□ -1.32
SSR1P43307 RPS4XP21-201ENST00000603814 750 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 AL137000.1-201ENST00000610528 1244 ntBASIC6.82□□□□□ -1.32
SSR1P43307 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.82□□□□□ -1.32
SSR1P43307 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.82□□□□□ -1.32
SSR1P43307 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSR1P43307 AC119674.1-213ENST00000641177 1386 ntBASIC6.82□□□□□ -1.32
SSR1P43307 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 AC027279.4-201ENST00000624371 2072 ntBASIC6.81□□□□□ -1.32
SSR1P43307 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 AC099654.3-201ENST00000447087 1546 ntBASIC6.81□□□□□ -1.32
SSR1P43307 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SSR1P43307 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 STAG3L4-201ENST00000352103 530 ntBASIC6.81□□□□□ -1.32
SSR1P43307 U3.52-201ENST00000384034 216 ntBASIC6.81□□□□□ -1.32
SSR1P43307 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.81□□□□□ -1.32
SSR1P43307 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.81□□□□□ -1.32
SSR1P43307 AL359092.1-201ENST00000417156 265 ntBASIC6.81□□□□□ -1.32
SSR1P43307 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SSR1P43307 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.81□□□□□ -1.32
SSR1P43307 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 AL845321.1-201ENST00000444603 348 ntBASIC6.81□□□□□ -1.32
SSR1P43307 AC022080.2-201ENST00000452932 533 ntBASIC6.81□□□□□ -1.32
SSR1P43307 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.81□□□□□ -1.32
SSR1P43307 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms