Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 RNU1-7P-201ENST00000364105 164 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 RNA5SP207-201ENST00000390874 107 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 SNORD86-201ENST00000391196 86 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 SNORA26.8-201ENST00000391306 124 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 FCF1P2-201ENST00000415284 583 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 VDAC1P2-201ENST00000423609 850 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 TMX2P1-201ENST00000436507 708 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AC083822.1-201ENST00000438001 201 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 SALL1P1-201ENST00000438101 3837 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC093166.1-201ENST00000442243 330 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 FTH1P7-201ENST00000450676 552 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AL365436.1-201ENST00000452587 495 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.77□□□□□ -1.33
VAMP1P23763 NDUFA12P1-201ENST00000455914 406 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 VN1R6P-201ENST00000458417 907 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.77□□□□□ -1.33
VAMP1P23763 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC6.77□□□□□ -1.33
VAMP1P23763 RACK1-211ENST00000504726 388 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC026700.1-201ENST00000512074 544 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AC091965.2-201ENST00000512324 613 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AF121898.1-203ENST00000518494 826 ntTSL 3 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC027309.2-201ENST00000520566 192 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 SLC2A13P1-201ENST00000531560 322 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC6.77□□□□□ -1.33
VAMP1P23763 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC6.77□□□□□ -1.33
VAMP1P23763 RFPL1S-203ENST00000539579 330 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 EIF4A3P1-201ENST00000578499 647 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.77□□□□□ -1.33
VAMP1P23763 ACP5-208ENST00000590420 301 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC6.77□□□□□ -1.33
VAMP1P23763 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.77□□□□□ -1.33
VAMP1P23763 U73023.1-201ENST00000603134 700 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 AL133520.1-201ENST00000610430 700 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 FAM238B-204ENST00000612040 423 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 7SK.12-201ENST00000612820 244 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 CARMN-212ENST00000614896 536 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VAMP1P23763 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 AC018558.4-201ENST00000622153 281 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 AC003992.1-201ENST00000635364 557 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
VAMP1P23763 CASC19-227ENST00000641411 1285 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC6.77□□□□□ -1.33
VAMP1P23763 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VAMP1P23763 AC097461.1-201ENST00000568928 2821 ntBASIC6.77□□□□□ -1.33
VAMP1P23763 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 UGT2B27P-201ENST00000505092 1620 ntBASIC6.76□□□□□ -1.33
VAMP1P23763 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.76□□□□□ -1.33
VAMP1P23763 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VAMP1P23763 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VAMP1P23763 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VAMP1P23763 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms