Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SNORA74.4-201ENST00000607595 199 ntBASIC6.63□□□□□ -1.35
KRT3P12035 AC006924.1-201ENST00000610750 559 ntBASIC6.63□□□□□ -1.35
KRT3P12035 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.63□□□□□ -1.35
KRT3P12035 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
KRT3P12035 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.63□□□□□ -1.35
KRT3P12035 AC079753.1-201ENST00000623243 3868 ntBASIC6.63□□□□□ -1.35
KRT3P12035 CCAT2-201ENST00000630920 1752 ntBASIC6.63□□□□□ -1.35
KRT3P12035 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.63□□□□□ -1.35
KRT3P12035 OR7E91P-202ENST00000642062 1198 ntBASIC6.63□□□□□ -1.35
KRT3P12035 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.63□□□□□ -1.35
KRT3P12035 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
KRT3P12035 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.63□□□□□ -1.35
KRT3P12035 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
KRT3P12035 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 DHFRP2-201ENST00000414224 547 ntBASIC6.62□□□□□ -1.35
KRT3P12035 RPS17P17-201ENST00000419392 409 ntBASIC6.62□□□□□ -1.35
KRT3P12035 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 MRPS21P3-201ENST00000436696 262 ntBASIC6.62□□□□□ -1.35
KRT3P12035 LDHAP2-201ENST00000437325 985 ntBASIC6.62□□□□□ -1.35
KRT3P12035 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 AC064862.5-201ENST00000440618 334 ntBASIC6.62□□□□□ -1.35
KRT3P12035 OR2L9P-201ENST00000444456 913 ntBASIC6.62□□□□□ -1.35
KRT3P12035 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.62□□□□□ -1.35
KRT3P12035 MORF4-201ENST00000447135 971 ntBASIC6.62□□□□□ -1.35
KRT3P12035 RPS18P1-201ENST00000447840 458 ntBASIC6.62□□□□□ -1.35
KRT3P12035 RN7SL221P-201ENST00000466190 281 ntBASIC6.62□□□□□ -1.35
KRT3P12035 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.62□□□□□ -1.35
KRT3P12035 RN7SL369P-201ENST00000477138 299 ntBASIC6.62□□□□□ -1.35
KRT3P12035 RNA5SP400-201ENST00000517155 111 ntBASIC6.62□□□□□ -1.35
KRT3P12035 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 CYCSP25-201ENST00000525280 316 ntBASIC6.62□□□□□ -1.35
KRT3P12035 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.62□□□□□ -1.35
KRT3P12035 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 MIR3189-201ENST00000578735 73 ntBASIC6.62□□□□□ -1.35
KRT3P12035 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 AC063977.7-201ENST00000594454 337 ntBASIC6.62□□□□□ -1.35
KRT3P12035 AL034374.2-201ENST00000605281 548 ntBASIC6.62□□□□□ -1.35
KRT3P12035 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
KRT3P12035 AC139426.3-201ENST00000605648 2059 ntBASIC6.62□□□□□ -1.35
KRT3P12035 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
KRT3P12035 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.62□□□□□ -1.35
KRT3P12035 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 MTND5P12-201ENST00000502851 1449 ntBASIC6.61□□□□□ -1.35
KRT3P12035 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 SNORA64.3-201ENST00000365647 134 ntBASIC6.61□□□□□ -1.35
KRT3P12035 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
KRT3P12035 TMA16P2-201ENST00000413187 601 ntBASIC6.61□□□□□ -1.35
KRT3P12035 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.61□□□□□ -1.35
KRT3P12035 AL356121.1-201ENST00000442911 156 ntBASIC6.61□□□□□ -1.35
KRT3P12035 AC245291.3-201ENST00000443400 292 ntBASIC6.61□□□□□ -1.35
KRT3P12035 AC234771.2-201ENST00000445718 597 ntBASIC6.61□□□□□ -1.35
KRT3P12035 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
KRT3P12035 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.61□□□□□ -1.35
KRT3P12035 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 RPL12P31-201ENST00000478433 450 ntBASIC6.61□□□□□ -1.35
KRT3P12035 SNRPCP11-201ENST00000492453 205 ntBASIC6.61□□□□□ -1.35
KRT3P12035 AC138517.1-201ENST00000515724 568 ntBASIC6.61□□□□□ -1.35
KRT3P12035 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.61□□□□□ -1.35
KRT3P12035 SUMO2P19-201ENST00000518920 295 ntBASIC6.61□□□□□ -1.35
KRT3P12035 OR4H6P-201ENST00000563771 921 ntBASIC6.61□□□□□ -1.35
KRT3P12035 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.61□□□□□ -1.35
KRT3P12035 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.61□□□□□ -1.35
KRT3P12035 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.61□□□□□ -1.35
KRT3P12035 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.61□□□□□ -1.35
KRT3P12035 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
KRT3P12035 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms