Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RB1P06400 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.84□□□□□ -1.31
RB1P06400 CFL1P4-201ENST00000451536 498 ntBASIC6.84□□□□□ -1.31
RB1P06400 HLA-DPA3-207ENST00000454398 229 ntBASIC6.84□□□□□ -1.31
RB1P06400 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RB1P06400 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
RB1P06400 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.84□□□□□ -1.31
RB1P06400 AC130365.2-201ENST00000525882 1201 ntBASIC6.84□□□□□ -1.31
RB1P06400 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.84□□□□□ -1.31
RB1P06400 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.84□□□□□ -1.31
RB1P06400 RN7SL475P-201ENST00000583379 298 ntBASIC6.84□□□□□ -1.31
RB1P06400 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.84□□□□□ -1.31
RB1P06400 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.84□□□□□ -1.31
RB1P06400 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.84□□□□□ -1.31
RB1P06400 AC245014.3-201ENST00000618589 347 ntBASIC6.84□□□□□ -1.31
RB1P06400 AC063952.1-203ENST00000634410 658 ntBASIC6.84□□□□□ -1.31
RB1P06400 CTAGE11P-201ENST00000451540 2353 ntBASIC6.84□□□□□ -1.31
RB1P06400 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.84□□□□□ -1.31
RB1P06400 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
RB1P06400 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
RB1P06400 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.84□□□□□ -1.32
RB1P06400 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
RB1P06400 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
RB1P06400 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.83□□□□□ -1.32
RB1P06400 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.83□□□□□ -1.32
RB1P06400 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
RB1P06400 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.83□□□□□ -1.32
RB1P06400 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.83□□□□□ -1.32
RB1P06400 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 RN7SL177P-201ENST00000476596 299 ntBASIC6.83□□□□□ -1.32
RB1P06400 RN7SL326P-201ENST00000477493 296 ntBASIC6.83□□□□□ -1.32
RB1P06400 RN7SL273P-201ENST00000481561 299 ntBASIC6.83□□□□□ -1.32
RB1P06400 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.83□□□□□ -1.32
RB1P06400 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.83□□□□□ -1.32
RB1P06400 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.83□□□□□ -1.32
RB1P06400 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RB1P06400 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.83□□□□□ -1.32
RB1P06400 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 NPM1P45-201ENST00000583151 559 ntBASIC6.83□□□□□ -1.32
RB1P06400 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.83□□□□□ -1.32
RB1P06400 BUB1P1-201ENST00000603541 607 ntBASIC6.83□□□□□ -1.32
RB1P06400 AC022960.2-201ENST00000616300 666 ntBASIC6.83□□□□□ -1.32
RB1P06400 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 SPATA31C2-201ENST00000324915 3777 ntBASIC6.83□□□□□ -1.32
RB1P06400 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.83□□□□□ -1.32
RB1P06400 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 AL136984.1-201ENST00000607611 1893 ntBASIC6.83□□□□□ -1.32
RB1P06400 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.83□□□□□ -1.32
RB1P06400 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RB1P06400 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 AC139426.3-201ENST00000605648 2059 ntBASIC6.82□□□□□ -1.32
RB1P06400 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RB1P06400 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RB1P06400 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 AC087752.1-201ENST00000391360 558 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC096537.2-201ENST00000413707 714 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 AL353662.1-201ENST00000439099 327 ntBASIC6.82□□□□□ -1.32
RB1P06400 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.82□□□□□ -1.32
RB1P06400 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.82□□□□□ -1.32
RB1P06400 NPM1P19-201ENST00000450070 712 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.82□□□□□ -1.32
RB1P06400 ACA64.1-201ENST00000459171 127 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.82□□□□□ -1.32
RB1P06400 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.82□□□□□ -1.32
RB1P06400 HMGB3P14-201ENST00000494195 599 ntBASIC6.82□□□□□ -1.32
RB1P06400 RNA5SP340-201ENST00000517132 107 ntBASIC6.82□□□□□ -1.32
RB1P06400 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.82□□□□□ -1.32
RB1P06400 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.82□□□□□ -1.32
RB1P06400 AC090022.1-201ENST00000546569 311 ntBASIC6.82□□□□□ -1.32
RB1P06400 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 RPA2P1-201ENST00000556557 721 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.82□□□□□ -1.32
RB1P06400 AP001823.1-201ENST00000604056 1003 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC126175.1-201ENST00000617041 758 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC131009.3-201ENST00000621809 287 ntBASIC6.82□□□□□ -1.32
RB1P06400 AC020763.5-201ENST00000623298 430 ntBASIC6.82□□□□□ -1.32
RB1P06400 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RB1P06400 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms