Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC022507.1-201ENST00000548349 1505 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC024651.2-201ENST00000562480 2098 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AL035422.1-201ENST00000414193 397 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 GAPDHP59-201ENST00000435908 267 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC079922.1-201ENST00000443291 359 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AL590004.3-202ENST00000445883 451 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 OR7E22P-201ENST00000478335 1035 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 RPL12P30-201ENST00000488389 499 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 RPS27P20-201ENST00000492051 246 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 RNA5SP441-201ENST00000516809 88 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AL078601.3-201ENST00000573303 535 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AP005136.2-201ENST00000583253 1049 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC020916.2-201ENST00000591242 360 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC005828.7-201ENST00000607331 556 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 AC116667.2-201ENST00000641075 823 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DQB2P05538 WBP11P1-201ENST00000562560 1931 ntBASIC6.29□□□□□ -1.4
HLA-DQB2P05538 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC009831.5-201ENST00000624000 3189 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC024587.1-201ENST00000505925 2157 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 CCNT2P1-201ENST00000423082 1315 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 RN7SKP237-201ENST00000364663 301 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 YWHAZP6-201ENST00000399764 738 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 HMGA1P8-201ENST00000414130 321 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AL139158.1-201ENST00000424719 340 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC099782.1-201ENST00000425889 474 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC007383.1-201ENST00000445875 636 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 YRDCP3-201ENST00000456507 480 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 MARK2P8-201ENST00000476069 952 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC113367.2-201ENST00000505749 160 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 NPIPB14P-203ENST00000532298 987 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 OR4A41P-201ENST00000533053 928 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC121758.1-202ENST00000556917 658 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AP001823.1-201ENST00000604056 1003 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC008555.7-201ENST00000605008 583 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AL080312.2-201ENST00000613001 630 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms