Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.27□□□□□ -1.41
LDLRP01130 CHCHD3P1-201ENST00000425516 676 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 ETF1P1-206ENST00000427296 984 ntBASIC6.27□□□□□ -1.41
LDLRP01130 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.27□□□□□ -1.41
LDLRP01130 AL121578.2-201ENST00000448797 447 ntBASIC6.27□□□□□ -1.41
LDLRP01130 RN7SL221P-201ENST00000466190 281 ntBASIC6.27□□□□□ -1.41
LDLRP01130 RN7SL379P-201ENST00000479912 293 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.27□□□□□ -1.41
LDLRP01130 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 IGHV1-14-201ENST00000523391 241 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.27□□□□□ -1.41
LDLRP01130 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.27□□□□□ -1.41
LDLRP01130 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LDLRP01130 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 OR1E3-201ENST00000575608 948 ntBASIC6.27□□□□□ -1.41
LDLRP01130 EIF4A3P1-201ENST00000578499 647 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC005726.4-201ENST00000582858 458 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.27□□□□□ -1.41
LDLRP01130 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.27□□□□□ -1.41
LDLRP01130 AC020914.7-201ENST00000594477 545 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC011891.2-201ENST00000604949 397 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC107308.1-201ENST00000615897 301 ntBASIC6.27□□□□□ -1.41
LDLRP01130 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC127071.2-201ENST00000623293 527 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC008691.1-209ENST00000642094 814 ntBASIC6.27□□□□□ -1.41
LDLRP01130 RACGAP1P-201ENST00000550663 1879 ntBASIC6.27□□□□□ -1.41
LDLRP01130 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
LDLRP01130 AL449283.1-201ENST00000602631 3403 ntBASIC6.27□□□□□ -1.41
LDLRP01130 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LDLRP01130 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.27□□□□□ -1.41
LDLRP01130 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.26□□□□□ -1.41
LDLRP01130 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.26□□□□□ -1.41
LDLRP01130 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.26□□□□□ -1.41
LDLRP01130 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LDLRP01130 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.26□□□□□ -1.41
LDLRP01130 RNU1-46P-201ENST00000384425 164 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AL359715.1-201ENST00000404330 555 ntBASIC6.26□□□□□ -1.41
LDLRP01130 RN7SKP240-201ENST00000410583 375 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.26□□□□□ -1.41
LDLRP01130 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.26□□□□□ -1.41
LDLRP01130 AL663061.1-201ENST00000416625 580 ntBASIC6.26□□□□□ -1.41
LDLRP01130 RPS17P17-201ENST00000419392 409 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.26□□□□□ -1.41
LDLRP01130 AC244033.1-201ENST00000426826 870 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AC239367.3-201ENST00000428996 814 ntBASIC6.26□□□□□ -1.41
LDLRP01130 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.26□□□□□ -1.41
LDLRP01130 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.26□□□□□ -1.41
LDLRP01130 HMGN1P2-201ENST00000445197 310 ntBASIC6.26□□□□□ -1.41
LDLRP01130 RPL7AP71-201ENST00000451120 739 ntBASIC6.26□□□□□ -1.41
LDLRP01130 PPP1R2P6-201ENST00000478565 588 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.26□□□□□ -1.41
LDLRP01130 RPS27P20-201ENST00000492051 246 ntBASIC6.26□□□□□ -1.41
LDLRP01130 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 TRIM51DP-201ENST00000529746 596 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AP004609.2-201ENST00000532177 190 ntBASIC6.26□□□□□ -1.41
LDLRP01130 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.26□□□□□ -1.41
LDLRP01130 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.26□□□□□ -1.41
LDLRP01130 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.26□□□□□ -1.41
LDLRP01130 AL035410.2-201ENST00000604963 864 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AC004908.1-201ENST00000606572 541 ntBASIC6.26□□□□□ -1.41
LDLRP01130 MIR6729-201ENST00000618194 65 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AC005899.7-201ENST00000618199 588 ntBASIC6.26□□□□□ -1.41
LDLRP01130 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.26□□□□□ -1.41
LDLRP01130 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.26□□□□□ -1.41
LDLRP01130 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 AC137056.2-201ENST00000624055 1958 ntBASIC6.26□□□□□ -1.41
LDLRP01130 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LDLRP01130 AC022613.3-201ENST00000560740 1346 ntBASIC6.25□□□□□ -1.41
LDLRP01130 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LDLRP01130 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LDLRP01130 QRSL1P1-201ENST00000400977 1540 ntBASIC6.25□□□□□ -1.41
LDLRP01130 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms