Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC092999.1-201ENST00000624004 1924 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC123769.2-201ENST00000624332 5984 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RN7SKP174-201ENST00000363803 330 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RNA5SP27-201ENST00000363839 119 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RNU6-1200P-201ENST00000384162 107 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL773545.3-201ENST00000414297 706 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 EIF1P1-201ENST00000421436 341 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 CNOT7P1-201ENST00000429006 852 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL354761.1-201ENST00000434190 526 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ACTBP12-201ENST00000435871 418 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL022721.1-201ENST00000436521 505 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ASH2LP1-201ENST00000438037 985 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL359711.1-201ENST00000441999 123 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 COX6CP2-201ENST00000444980 225 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 SFTPA3P-201ENST00000446429 367 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 GAS5-219ENST00000449289 542 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL096803.1-201ENST00000456921 1021 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RNU7-140P-201ENST00000459546 60 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RPL9P33-201ENST00000484311 566 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL024509.2-201ENST00000493462 493 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC113430.1-201ENST00000506872 718 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RNU6-678P-201ENST00000516832 109 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RN7SKP197-201ENST00000517077 297 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 DUXAP2-201ENST00000519198 589 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 OR5AZ1P-201ENST00000527448 943 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 OR4N1P-201ENST00000554847 949 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC027104.1-201ENST00000563702 681 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC134669.1-201ENST00000581275 672 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL021368.3-201ENST00000607119 578 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC011374.2-201ENST00000607135 526 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC080013.4-201ENST00000607624 649 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC097505.1-201ENST00000610199 565 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC024941.1-201ENST00000612250 334 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL451054.1-201ENST00000621770 772 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 CDY11P-201ENST00000447168 1651 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC004520.1-201ENST00000608362 1413 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AL137100.1-201ENST00000556703 1620 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ZNF300P1-201ENST00000356555 1822 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms