Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PTCD2P2-201ENST00000415579 1095 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC079922.1-201ENST00000443291 359 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 RPL23AP60-201ENST00000450011 454 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 RN7SKP35-201ENST00000517210 151 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC008429.4-201ENST00000521201 182 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 TRIM51DP-201ENST00000529746 596 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC092865.1-201ENST00000544395 1023 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC092332.1-201ENST00000563684 829 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 RN7SKP237-201ENST00000364663 301 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 RNA5SP251-201ENST00000410614 137 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 RPS15AP30-201ENST00000420976 390 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC242426.1-201ENST00000435270 960 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 TRIM60P16-201ENST00000444048 694 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 NDUFA5P5-201ENST00000468361 342 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC009879.1-201ENST00000520029 839 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC119403.2-201ENST00000590960 598 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 BX323046.1-201ENST00000610145 535 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC104966.1-201ENST00000467010 1464 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 RBMY1HP-201ENST00000382759 1389 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC007562.1-201ENST00000421819 517 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC023274.2-201ENST00000445264 521 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC114728.1-201ENST00000488289 483 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 LSM3P4-201ENST00000502948 309 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC090651.1-201ENST00000567865 634 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 RNU4ATAC-201ENST00000580972 127 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AC092266.1-201ENST00000610958 165 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 AL357562.1-201ENST00000624911 609 ntBASIC8.35□□□□□ -1.07
NPC1L1Q9UHC9 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 QRSL1P1-201ENST00000400977 1540 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AL354854.1-201ENST00000455940 1363 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms