Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 RN7SKP104-201ENST00000362605 328 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 AC005297.1-201ENST00000444765 862 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 FRG2FP-204ENST00000453982 852 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 BRD9P1-201ENST00000529855 560 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 AC027229.1-201ENST00000583887 253 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 AC068790.4-201ENST00000602474 263 ntBASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
RIMBP3Q9UFD9 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 MON2-214ENST00000641654 10382 ntBASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 PCDHA10-203ENST00000562220 12358 ntBASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AL133325.1-201ENST00000421090 382 ntBASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AC114728.1-201ENST00000488289 483 ntBASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AC131009.3-201ENST00000621809 287 ntBASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RIMBP3Q9UFD9 USP3-201ENST00000268049 5311 ntTSL 5 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 AC006141.1-201ENST00000581917 2170 ntBASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 SNORA62-201ENST00000365493 153 ntBASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 AC126177.5-201ENST00000549599 178 ntBASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 AC006116.3-201ENST00000592968 361 ntBASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 OR8B9P-202ENST00000642028 5216 ntBASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RIMBP3Q9UFD9 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 RNU1-77P-201ENST00000390868 162 ntBASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AL360271.1-201ENST00000395679 510 ntBASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AL590240.2-201ENST00000413370 894 ntBASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AC108075.1-201ENST00000424692 529 ntBASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AC026367.2-201ENST00000610630 553 ntBASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 AC232271.1-201ENST00000602455 2715 ntBASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms