Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPL7AP10-201ENST00000481016 791 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 MIR4480-201ENST00000582492 71 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AL591167.1-201ENST00000607321 456 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 MIR92B-201ENST00000607575 96 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHD8Q9HCK8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHD8Q9HCK8 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.48
CHD8Q9HCK8 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHD8Q9HCK8 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHD8Q9HCK8 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL390119.1-201ENST00000440329 312 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 SNORA70.20-201ENST00000516848 126 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AP005597.2-201ENST00000526238 341 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AC025162.2-201ENST00000619602 560 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 U3.2-201ENST00000362981 210 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RNA5SP234-201ENST00000363916 119 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 SNORA70.2-201ENST00000364506 135 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL132875.1-201ENST00000403623 949 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RPL34P19-201ENST00000415903 342 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AC012075.1-201ENST00000436549 580 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RPS29P33-201ENST00000456717 146 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RN7SL72P-201ENST00000460697 269 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AC020898.1-201ENST00000474167 787 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RN7SL583P-201ENST00000475692 287 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 OR2AO1P-201ENST00000476497 403 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RN7SL481P-201ENST00000477764 299 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AC072052.1-201ENST00000496556 306 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 SAA3P-201ENST00000533267 365 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 AL161729.2-201ENST00000605700 456 ntBASIC5.83□□□□□ -1.48
CHD8Q9HCK8 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD8Q9HCK8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC008555.1-201ENST00000561778 2757 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 RNA5SP394-201ENST00000364216 119 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 GTF2IP2-201ENST00000424290 697 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 RPS4XP1-201ENST00000482189 787 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 PDCL3P4-201ENST00000489621 720 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 CDC42P3-201ENST00000518493 633 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 WBP1LP3-201ENST00000523033 208 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC090616.1-201ENST00000583895 447 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC234771.5-201ENST00000600161 514 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC243756.2-201ENST00000618406 463 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC009237.3-203ENST00000442128 3551 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms