Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AL356121.1-201ENST00000442911 156 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AC079922.1-201ENST00000443291 359 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 CEACAMP11-201ENST00000455211 583 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AC114728.1-201ENST00000488289 483 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RPL3P13-201ENST00000550415 216 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AC093524.1-201ENST00000564266 1094 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 MIR3189-201ENST00000578735 73 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AL021368.3-201ENST00000607119 578 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AL157762.1-201ENST00000619612 415 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 RPL31P11-201ENST00000426558 1558 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 ZNF658B-201ENST00000602828 3408 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 VIM2P-201ENST00000402383 1294 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 OR6R1P-201ENST00000431838 940 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 MED28P4-201ENST00000433137 572 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC064862.5-201ENST00000440618 334 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 MTCO3P17-201ENST00000443775 513 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 RPS27AP3-201ENST00000453803 454 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AL022319.1-201ENST00000458183 1167 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 SNRPCP11-201ENST00000492453 205 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 RNU6-751P-201ENST00000516382 101 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC037479.1-201ENST00000558361 625 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC007494.1-201ENST00000562293 760 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AL161912.3-201ENST00000605404 628 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AL589743.6-201ENST00000611025 117 ntBASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH9Q9HC56 AC034229.2-201ENST00000566945 2508 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 GUCY1B2-204ENST00000531898 1979 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms