Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 NEK2P4-201ENST00000425793 1329 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AL512310.3-201ENST00000547023 1335 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC024651.2-201ENST00000562480 2098 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AL731556.1-201ENST00000394628 3711 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 RNA5SP433-201ENST00000364491 114 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 RN7SKP47-201ENST00000365347 328 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 RNU1-55P-201ENST00000365510 158 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC128677.1-201ENST00000436016 442 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 RN7SL492P-201ENST00000460700 295 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 RPS27P20-201ENST00000492051 246 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AL035410.2-201ENST00000604963 864 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC068726.1-201ENST00000610993 341 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC111152.1-202ENST00000635848 339 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC027559.1-201ENST00000636288 271 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AP000550.3-201ENST00000637734 379 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC079949.2-201ENST00000617117 2933 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 AC093671.1-201ENST00000624981 2929 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM4Q9C037 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 CDY19P-201ENST00000411668 1613 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 CDY18P-201ENST00000438294 1609 ntBASIC6.53□□□□□ -1.36
TRIM4Q9C037 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM4Q9C037 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM4Q9C037 AC087516.1-201ENST00000561236 2428 ntBASIC6.52□□□□□ -1.36
TRIM4Q9C037 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC096992.2-201ENST00000609553 1684 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC016745.2-201ENST00000608834 3443 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 RNA5SP308-201ENST00000362532 115 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC117434.1-201ENST00000419971 836 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 CDC42P6-201ENST00000421246 576 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC000089.1-201ENST00000424559 801 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 RPS3AP49-201ENST00000472161 790 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC005017.1-201ENST00000482002 490 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC104109.1-201ENST00000498563 436 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC026782.2-201ENST00000510845 636 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 DCAF13P2-201ENST00000514188 555 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC009879.1-201ENST00000520029 839 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 IGKV3D-34-201ENST00000522638 302 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC079866.1-201ENST00000534985 1220 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 HMGN2P47-201ENST00000559378 272 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 OR1E3-201ENST00000575608 948 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC097641.3-201ENST00000613523 464 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 MRPL57P3-201ENST00000619218 176 ntBASIC6.52□□□□□ -1.37
TRIM4Q9C037 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms