Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC025518.2-201ENST00000605229 492 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AL022345.3-201ENST00000611406 228 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AL442067.1-201ENST00000613261 223 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC243756.2-201ENST00000618406 463 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 TPTEP1-208ENST00000636884 213 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 CTBP2P2-201ENST00000434549 1334 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AL031651.1-201ENST00000615357 1438 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 LINC00663-203ENST00000586885 2546 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC211476.4-201ENST00000275546 699 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 Y_RNA.157-201ENST00000363638 102 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 SNORA4.3-201ENST00000365564 137 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 PMS2P5-201ENST00000398065 516 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AL590617.1-201ENST00000405630 748 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 RN7SKP32-201ENST00000410167 303 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC062016.2-201ENST00000420950 676 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC236972.2-201ENST00000434979 310 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 FTH1P16-201ENST00000435241 552 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 RPL7P54-201ENST00000438336 674 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AL353072.1-201ENST00000446021 442 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 RPL10AP3-201ENST00000462503 651 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 RN7SL35P-201ENST00000466169 292 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC010307.1-201ENST00000467206 836 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 RN7SL571P-201ENST00000468302 295 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC034207.1-201ENST00000506742 948 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC024451.1-201ENST00000508013 779 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 RNA5SP216-201ENST00000516111 123 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 FDPSP4-201ENST00000534629 1049 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC090424.1-201ENST00000535243 736 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC026470.2-201ENST00000561492 181 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 ZNF322P1-201ENST00000568013 1209 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 MIR3663-201ENST00000583207 97 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 PRR13P5-201ENST00000596581 442 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 PRR13P3-201ENST00000603578 376 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC004853.1-201ENST00000604902 698 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms