Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC006484.1-201ENST00000435086 1884 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 NEK2P2-201ENST00000438441 1338 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AP000473.2-201ENST00000602659 1537 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RNA5SP302-201ENST00000364896 100 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RNA5SP187-201ENST00000384400 119 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC121334.1-201ENST00000396414 802 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RN7SKP268-201ENST00000411107 316 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AL929472.1-201ENST00000417484 429 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RPL12P16-201ENST00000431098 498 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 OSTCP2-201ENST00000437956 444 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC009237.1-201ENST00000442127 744 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RPL7L1P3-201ENST00000455249 689 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RPS4XP19-201ENST00000460237 736 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RPS12P20-201ENST00000464109 380 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RN7SL390P-201ENST00000470634 284 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 RPL12P24-201ENST00000474907 486 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AL390198.2-201ENST00000510553 222 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 IGKV1D-22-201ENST00000518953 324 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AL445383.1-201ENST00000554689 874 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC019322.1-201ENST00000571869 389 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 TXNP4-201ENST00000575018 310 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC024614.1-201ENST00000577546 307 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC016839.1-201ENST00000578162 867 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 ACTG1P22-201ENST00000603793 1099 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 FRG2MP-201ENST00000613317 856 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC116165.3-201ENST00000614524 400 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC106782.7-201ENST00000624024 418 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC133555.5-201ENST00000624430 418 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC243725.1-201ENST00000637164 436 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC022325.1-201ENST00000502748 2199 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC012078.1-201ENST00000405035 1646 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AL353763.1-201ENST00000624467 1628 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.72□□□□□ -1.65
AP1S3Q96PC3 KYNUP3-201ENST00000574386 1341 ntBASIC4.72□□□□□ -1.65
AP1S3Q96PC3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
AP1S3Q96PC3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
AP1S3Q96PC3 AC097063.1-201ENST00000426714 1797 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RNA5SP478-201ENST00000364657 115 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RN7SKP189-201ENST00000365042 330 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 UBBP1-201ENST00000392399 473 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL359694.1-201ENST00000403247 604 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL359092.1-201ENST00000417156 265 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 PUDPP2-201ENST00000431423 643 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RPS13P2-201ENST00000437890 455 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RPL26P30-201ENST00000453533 435 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 MED28P7-201ENST00000456611 530 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RPL23AP64-201ENST00000469465 435 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 RPL7AP30-201ENST00000482859 796 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms