Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.47□□□□□ -1.05
HLA-CQ95604 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AC089998.1-201ENST00000548575 3141 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
HLA-CQ95604 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
HLA-CQ95604 Y_RNA.89-201ENST00000363031 102 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 MRPL32P1-201ENST00000406301 247 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 OR2W4P-201ENST00000406496 926 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AL121878.1-201ENST00000418638 859 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AC013429.2-201ENST00000418798 781 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AL389915.1-201ENST00000422463 466 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AL513185.2-201ENST00000425543 193 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 LSM3P3-201ENST00000436601 306 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 RPS4XP4-201ENST00000443195 763 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AL033528.1-201ENST00000453780 140 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 WBP1LP1-201ENST00000460451 896 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 RPS6P25-201ENST00000464444 748 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AP000797.1-201ENST00000478870 387 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 RNU6-1045P-201ENST00000516321 107 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 Y_RNA.675-201ENST00000516389 149 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 TBCA-203ENST00000517679 545 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-CQ95604 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AC090971.3-201ENST00000557871 1041 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 HMGN1P26-201ENST00000558737 303 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-CQ95604 RBM22P12-201ENST00000567098 1255 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 MIR4637-201ENST00000582405 84 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AL161729.3-201ENST00000603533 673 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AC135507.2-201ENST00000612443 309 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 MIR6889-201ENST00000613185 59 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AC079684.1-201ENST00000621405 437 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AC114546.4-201ENST00000624413 369 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 FKBP1AP4-201ENST00000631775 336 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 MIR6863-201ENST00000636112 90 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AC243725.1-201ENST00000637164 436 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 ABBA01000935.2-201ENST00000637477 838 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 AP004289.1-201ENST00000436307 2205 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-CQ95604 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-CQ95604 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-CQ95604 AC012078.1-201ENST00000405035 1646 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-CQ95604 AC007614.2-201ENST00000569877 1851 ntBASIC8.47□□□□□ -1.05
HLA-CQ95604 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-CQ95604 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.46□□□□□ -1.05
HLA-CQ95604 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-CQ95604 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
HLA-CQ95604 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-CQ95604 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-CQ95604 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC8.46□□□□□ -1.05
HLA-CQ95604 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
HLA-CQ95604 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-CQ95604 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HLA-CQ95604 Y_RNA.356-201ENST00000365475 113 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 GAS8-AS1-201ENST00000408886 435 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AC007390.1-201ENST00000415722 356 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 LINC00993-201ENST00000420453 540 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms