Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MIR6813-201ENST00000621638 56 ntBASIC6.65□□□□□ -1.34
LMO3Q8TAP4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.65□□□□□ -1.34
LMO3Q8TAP4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
LMO3Q8TAP4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
LMO3Q8TAP4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.65□□□□□ -1.35
LMO3Q8TAP4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
LMO3Q8TAP4 AL355377.1-201ENST00000621125 1653 ntBASIC6.65□□□□□ -1.35
LMO3Q8TAP4 AC005725.1-201ENST00000577346 2607 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AC024651.2-201ENST00000562480 2098 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AL451142.1-201ENST00000375867 775 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 PSMA6P1-201ENST00000400275 741 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AL035422.1-201ENST00000414193 397 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 PTCD2P2-201ENST00000415579 1095 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 BTG1P1-201ENST00000540396 508 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 WBP1LP11-201ENST00000586141 328 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 RPSAP75-201ENST00000605848 301 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AC141002.1-201ENST00000607025 279 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AL157762.1-201ENST00000619612 415 ntBASIC6.64□□□□□ -1.35
LMO3Q8TAP4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LMO3Q8TAP4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 MIR191-201ENST00000384873 92 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC114982.2-201ENST00000461396 358 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 RN7SL552P-201ENST00000462094 276 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 RN7SL612P-201ENST00000497704 295 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 HMGN1P17-201ENST00000513734 295 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 LDHBP3-201ENST00000514909 822 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC007494.1-201ENST00000562293 760 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 SMIM12P1-201ENST00000603004 274 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 RN7SL261P-201ENST00000613441 282 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 AP003789.1-201ENST00000617737 605 ntBASIC6.63□□□□□ -1.35
LMO3Q8TAP4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.63□□□□□ -1.35
LMO3Q8TAP4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LMO3Q8TAP4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LMO3Q8TAP4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMO3Q8TAP4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMO3Q8TAP4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LMO3Q8TAP4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMO3Q8TAP4 AC093829.1-201ENST00000506662 1618 ntBASIC6.62□□□□□ -1.35
LMO3Q8TAP4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms