Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AC245452.2-201ENST00000435222 392 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AL136455.1-201ENST00000441083 1240 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AC015864.1-201ENST00000496512 544 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AC106730.2-201ENST00000566641 540 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 AC112200.1-201ENST00000625015 234 ntBASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMCN2Q8NDA2 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RNU1-43P-201ENST00000365052 165 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RN7SL561P-201ENST00000488553 281 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RN7SL447P-201ENST00000494711 245 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AC138969.2-201ENST00000532739 9932 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 NRAP-202ENST00000360478 5426 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RBBP4P4-201ENST00000398588 1289 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 MTND6P2-201ENST00000512226 524 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RN7SKP100-201ENST00000411258 284 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AC016027.4-201ENST00000450866 277 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 RNU6-941P-201ENST00000516346 108 ntBASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.22□□□□□ -1.89
HMCN2Q8NDA2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms