Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 RBBP4P5-201ENST00000398583 1266 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 RN7SKP108-201ENST00000411367 328 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC108479.1-201ENST00000431142 427 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 VPS25P1-201ENST00000455691 508 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC091193.1-201ENST00000604640 448 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AC010998.3-201ENST00000613871 631 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 TCL6_3.1-201ENST00000619064 137 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AL109924.4-201ENST00000623089 670 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 AP003486.1-201ENST00000525716 3994 ntBASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf40Q8IXQ3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC011369.2-201ENST00000624423 1567 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC011815.2-201ENST00000618230 2021 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AL445238.1-204ENST00000400311 463 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC099535.1-201ENST00000408928 371 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC092865.3-201ENST00000425390 1026 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 RPSAP65-201ENST00000429660 595 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 MORF4-201ENST00000447135 971 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 HIGD1AP16-201ENST00000450986 258 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 RANP2-201ENST00000456833 229 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 SNX18P24-201ENST00000505249 671 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC095052.1-201ENST00000509955 863 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 NATP-201ENST00000523491 878 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AP005639.1-201ENST00000526939 192 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC036111.2-201ENST00000533247 901 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC023310.2-201ENST00000553844 547 ntBASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.81□□□□□ -1.48
C9orf40Q8IXQ3 AP005136.2-201ENST00000583253 1049 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms