Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RNFT1P3-201ENST00000340898 1052 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 MIR135B-201ENST00000362189 97 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RNA5SP427-201ENST00000365323 119 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ERHP2-201ENST00000402323 299 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RPL7P27-201ENST00000403775 720 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 PUDPP1-201ENST00000421058 495 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RPL4P4-201ENST00000422486 1284 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC009480.2-201ENST00000422916 432 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 TRIM60P10Y-201ENST00000425589 751 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC112653.1-201ENST00000443851 386 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL606662.1-201ENST00000445763 553 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL121769.1-201ENST00000469473 401 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC004924.1-201ENST00000480160 781 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 OR2A3P-201ENST00000493774 953 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 NIPA2P2-201ENST00000496376 1083 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC008628.2-201ENST00000502605 298 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 FAM92A1P2-202ENST00000504766 877 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 HMGB3P13-201ENST00000511263 607 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC024589.1-201ENST00000512207 263 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 OR4A21P-201ENST00000532759 944 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 DUXAP1-201ENST00000556632 463 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC087045.1-201ENST00000605856 382 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC006338.1-201ENST00000618453 749 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 HYDIN2-203ENST00000614586 13885 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AC090983.1-201ENST00000623426 3897 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AC007938.1-201ENST00000562524 2902 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AC087359.1-201ENST00000508335 1740 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AL672167.1-206ENST00000356293 943 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 RNU6-1005P-201ENST00000384519 107 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AL356057.2-201ENST00000403318 432 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AL356432.2-201ENST00000407841 422 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 RNU2-5P-201ENST00000410533 180 ntBASIC8.06□□□□□ -1.12
FOXR1Q6PIV2 AC017104.2-201ENST00000417000 321 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms