Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 RNA5SP394-201ENST00000364216 119 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 MIR640-201ENST00000385086 96 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 RN7SL72P-201ENST00000460697 269 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 WBP1LP3-201ENST00000523033 208 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AP005639.1-201ENST00000526939 192 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 SUMO2P15-201ENST00000604285 278 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AC126120.1-201ENST00000431082 470 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 CUBNP2-201ENST00000443534 1139 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 RPS3AP15-201ENST00000483874 781 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AC024451.1-201ENST00000508013 779 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 IGKV2-18-201ENST00000522607 343 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 IGLV3-30-201ENST00000524362 298 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AC119403.2-201ENST00000590960 598 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 AL445647.2-201ENST00000615170 130 ntBASIC9.17□□□□□ -0.94
CDC42BPAQ5VT25 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 RBPJP7-201ENST00000442803 1447 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 RBPJP5-201ENST00000449433 1447 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 RN7SKP124-201ENST00000364730 341 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 RN7SL727P-201ENST00000482164 296 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AC073916.1-201ENST00000545095 130 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AC022404.1-201ENST00000555320 273 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AC090651.1-201ENST00000567865 634 ntBASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42BPAQ5VT25 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 AC105342.1-201ENST00000378334 6848 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 RNA5SP478-201ENST00000364657 115 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 NPM1P4-201ENST00000414095 812 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 EEF1A1P29-201ENST00000416082 1096 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 AL627308.1-201ENST00000435693 821 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 AC023245.1-201ENST00000468501 517 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 GAPDHP71-201ENST00000511530 1003 ntBASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42BPAQ5VT25 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms