Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC092967.1-201ENST00000449016 481 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AL359839.1-201ENST00000451975 1160 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC094085.1-201ENST00000468914 584 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC090568.1-201ENST00000509499 856 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 Y_RNA.710-201ENST00000516975 110 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.35□□□□□ -1.23
GABPAQ06546 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC027229.1-201ENST00000583887 253 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC067773.1-201ENST00000603284 1094 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC006924.1-201ENST00000610750 559 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 AC024255.1-201ENST00000614376 102 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.35□□□□□ -1.23
GABPAQ06546 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.35□□□□□ -1.23
GABPAQ06546 AL359976.1-201ENST00000418655 3528 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 AL731556.1-201ENST00000394628 3711 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.35□□□□□ -1.23
GABPAQ06546 AC022905.1-201ENST00000503430 3048 ntBASIC7.35□□□□□ -1.23
GABPAQ06546 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.35□□□□□ -1.23
GABPAQ06546 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
GABPAQ06546 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.34□□□□□ -1.23
GABPAQ06546 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.34□□□□□ -1.23
GABPAQ06546 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.34□□□□□ -1.23
GABPAQ06546 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 AC009948.3-201ENST00000603415 1798 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
GABPAQ06546 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 AL445238.1-204ENST00000400311 463 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 LYPLA1P3-201ENST00000402650 695 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 RANP2-201ENST00000456833 229 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 AC026254.2-201ENST00000475295 371 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.34□□□□□ -1.23
GABPAQ06546 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
GABPAQ06546 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.34□□□□□ -1.23
GABPAQ06546 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.34□□□□□ -1.23
GABPAQ06546 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.34□□□□□ -1.23
GABPAQ06546 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.34□□□□□ -1.23
GABPAQ06546 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.34□□□□□ -1.23
GABPAQ06546 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.34□□□□□ -1.23
GABPAQ06546 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 AC073488.3-201ENST00000631611 778 ntBASIC7.34□□□□□ -1.23
GABPAQ06546 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
GABPAQ06546 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.34□□□□□ -1.23
GABPAQ06546 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
GABPAQ06546 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.34□□□□□ -1.24
GABPAQ06546 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.34□□□□□ -1.24
GABPAQ06546 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
GABPAQ06546 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.34□□□□□ -1.24
GABPAQ06546 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 AC022325.1-201ENST00000502748 2199 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.33□□□□□ -1.24
GABPAQ06546 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 AC008627.1-201ENST00000517511 1704 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 PARP4P1-201ENST00000435945 2337 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
GABPAQ06546 RNA5SP478-201ENST00000364657 115 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 GAPDHP23-201ENST00000444823 993 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 VPS25P1-201ENST00000455691 508 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 CST12P-201ENST00000457644 362 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.33□□□□□ -1.24
GABPAQ06546 AC021269.1-201ENST00000526860 705 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms