Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CXADRP3-202ENST00000617265 1100 ntBASIC6.27□□□□□ -1.41
CDK3Q00526 AC073592.6-201ENST00000624271 415 ntBASIC6.27□□□□□ -1.41
CDK3Q00526 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK3Q00526 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CDK3Q00526 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK3Q00526 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK3Q00526 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK3Q00526 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK3Q00526 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK3Q00526 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK3Q00526 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDK3Q00526 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 CUBNP3-201ENST00000457461 1784 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 TET1P1-201ENST00000426627 2301 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK3Q00526 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 FAM32BP-201ENST00000344033 333 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDK3Q00526 SNORA11.5-201ENST00000408163 128 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 RPL7AP14-201ENST00000424041 802 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK3Q00526 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 RN7SL326P-201ENST00000477493 296 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 DPPA3P2-201ENST00000553589 478 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AL121579.2-201ENST00000555466 590 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 AL845552.1-201ENST00000556820 323 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK3Q00526 AC026826.3-201ENST00000561747 158 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK3Q00526 MIR4502-201ENST00000580432 81 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 NF1P10-201ENST00000613227 742 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 MIR7159-201ENST00000620587 66 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 AP001052.1-201ENST00000626421 99 ntBASIC6.26□□□□□ -1.41
CDK3Q00526 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CDK3Q00526 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDK3Q00526 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK3Q00526 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CDK3Q00526 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 AC233968.1-201ENST00000611212 1300 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK3Q00526 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CDK3Q00526 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 AC105235.1-201ENST00000623208 1816 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 PARP4P1-201ENST00000435945 2337 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 AC006213.6-201ENST00000623722 4179 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 OR56A4-201ENST00000330728 1209 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDK3Q00526 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK3Q00526 MIR621-201ENST00000384919 96 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 RNA5SP431-201ENST00000410312 120 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 RN7SKP108-201ENST00000411367 328 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK3Q00526 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK3Q00526 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK3Q00526 RFESDP1-201ENST00000422350 461 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK3Q00526 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK3Q00526 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK3Q00526 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK3Q00526 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK3Q00526 HMGB1P7-201ENST00000450921 612 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 AL133351.3-201ENST00000454998 193 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK3Q00526 RPL12P30-201ENST00000488389 499 ntBASIC6.25□□□□□ -1.41
CDK3Q00526 AP002453.1-201ENST00000492327 668 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms