Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP001000.1-201ENST00000526843 742 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 BTG1P1-201ENST00000540396 508 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3AP84243 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 AC009120.3-201ENST00000563335 499 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 MT1CP-201ENST00000567054 174 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 AC137695.1-201ENST00000604126 489 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 WBP1LP12-201ENST00000604449 331 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 AC105749.1-201ENST00000631338 2008 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 SSXP3-201ENST00000442971 1300 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 SAMMSON-210ENST00000641260 1308 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 MAPK10-261ENST00000641050 3109 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 CASC19-246ENST00000641625 1606 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 RNA5SP478-201ENST00000364657 115 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 RNA5SP77-201ENST00000365394 120 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC009237.1-201ENST00000442127 744 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 OR9A1P-202ENST00000484361 945 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 AC010343.2-201ENST00000510162 224 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3AP84243 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3AP84243 AL589863.1-201ENST00000595383 631 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3AP84243 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 AC011815.2-201ENST00000618230 2021 ntBASIC5.67□□□□□ -1.5
H3F3AP84243 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3AP84243 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3AP84243 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3AP84243 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
H3F3AP84243 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 GUCY1B2-204ENST00000531898 1979 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 AL157702.1-201ENST00000398764 426 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 RPL7AP51-201ENST00000422016 760 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms