Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.65□□□□□ -1.18
RHBDL3P58872 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.65□□□□□ -1.18
RHBDL3P58872 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 AC010240.2-201ENST00000445363 1205 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 NDUFA5P5-201ENST00000468361 342 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 RN7SL369P-201ENST00000477138 299 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 RN7SL705P-201ENST00000481678 294 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 RPL12P30-201ENST00000488389 499 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 RN7SKP35-201ENST00000517210 151 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.65□□□□□ -1.18
RHBDL3P58872 IGKV3D-25-201ENST00000519599 235 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 AP004609.2-201ENST00000532177 190 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.65□□□□□ -1.18
RHBDL3P58872 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.65□□□□□ -1.18
RHBDL3P58872 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.65□□□□□ -1.18
RHBDL3P58872 AC090616.1-201ENST00000583895 447 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.65□□□□□ -1.18
RHBDL3P58872 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.65□□□□□ -1.18
RHBDL3P58872 MIR6861-201ENST00000618657 64 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 AF117829.2-201ENST00000619538 361 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.65□□□□□ -1.18
RHBDL3P58872 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RHBDL3P58872 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
RHBDL3P58872 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RHBDL3P58872 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RHBDL3P58872 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RHBDL3P58872 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RHBDL3P58872 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 AC009120.2-204ENST00000621548 2032 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 DDX18P6-201ENST00000450119 1997 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 OR2M1P-201ENST00000318104 951 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 RNA5SP110-201ENST00000362638 115 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 SNORD16-201ENST00000362803 99 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.64□□□□□ -1.19
RHBDL3P58872 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.64□□□□□ -1.19
RHBDL3P58872 RAB9AP4-201ENST00000415230 609 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 KCTD9P1-201ENST00000430462 1167 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.64□□□□□ -1.19
RHBDL3P58872 AMYP1-201ENST00000440059 1023 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 SOCS5P1-201ENST00000440415 949 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RHBDL3P58872 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.64□□□□□ -1.19
RHBDL3P58872 AC093827.1-201ENST00000480094 861 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 OR4D12P-201ENST00000509361 911 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 AC095052.1-201ENST00000509955 863 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 KHDC1P1-201ENST00000511053 508 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 NPM1P45-201ENST00000583151 559 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 AC005332.4-201ENST00000592752 579 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 RNU6-84P-201ENST00000607737 102 ntBASIC7.64□□□□□ -1.19
RHBDL3P58872 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
RHBDL3P58872 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RHBDL3P58872 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.64□□□□□ -1.19
RHBDL3P58872 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RHBDL3P58872 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.63□□□□□ -1.19
RHBDL3P58872 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.63□□□□□ -1.19
RHBDL3P58872 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RHBDL3P58872 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.63□□□□□ -1.19
RHBDL3P58872 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AC092111.2-201ENST00000611627 1414 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AC104581.5-201ENST00000624171 7141 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.63□□□□□ -1.19
RHBDL3P58872 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms