Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN20P56880 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.96□□□□□ -1.46
CLDN20P56880 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN20P56880 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.96□□□□□ -1.46
CLDN20P56880 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
CLDN20P56880 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CLDN20P56880 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AL589826.1-201ENST00000340697 249 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AL049697.3-201ENST00000406493 982 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AL929472.1-201ENST00000417484 429 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AC013410.1-201ENST00000436223 1232 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 COL11A2P1-205ENST00000441798 676 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN20P56880 CCNJP1-201ENST00000450600 1149 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 SULT1D1P-201ENST00000458020 882 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AC004890.1-201ENST00000461005 181 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.95□□□□□ -1.46
CLDN20P56880 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN20P56880 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AC093870.1-201ENST00000506837 213 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AC093664.1-201ENST00000511779 289 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN20P56880 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN20P56880 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC106785.4-201ENST00000569492 412 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AP003115.1-201ENST00000569849 463 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.95□□□□□ -1.46
CLDN20P56880 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC009237.12-201ENST00000604755 742 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 SNORA35B-201ENST00000607417 129 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AC093635.1-201ENST00000609028 555 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 GAPDHP41-201ENST00000613707 975 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AC018692.2-201ENST00000624130 348 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN20P56880 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN20P56880 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC004014.2-201ENST00000623718 5122 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.95□□□□□ -1.46
CLDN20P56880 AC217777.1-201ENST00000570034 1471 ntBASIC5.95□□□□□ -1.46
CLDN20P56880 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CLDN20P56880 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN20P56880 AC007485.2-201ENST00000623493 1667 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.94□□□□□ -1.46
CLDN20P56880 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLDN20P56880 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLDN20P56880 OR7E25P-201ENST00000344844 931 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 MIR191-201ENST00000384873 92 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.94□□□□□ -1.46
CLDN20P56880 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CLDN20P56880 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 GAPDHP19-201ENST00000431768 1005 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AL355355.1-201ENST00000442900 793 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AC099670.1-201ENST00000455141 783 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 RBMY2HP-201ENST00000457961 720 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 RN7SL836P-201ENST00000476140 296 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CLDN20P56880 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN20P56880 OR51A1P-201ENST00000511110 946 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 IGKV2-19-201ENST00000518132 283 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN20P56880 AP003168.1-201ENST00000530091 307 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CLDN20P56880 HNRNPCP1-201ENST00000556181 766 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLDN20P56880 MIR3157-201ENST00000578688 85 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.94□□□□□ -1.46
CLDN20P56880 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN20P56880 AL953862.2-201ENST00000603089 820 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms