Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL451046.1-201ENST00000406097 534 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
LIMK2P53671 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 RNU4-64P-201ENST00000410795 131 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 HMGA1P8-201ENST00000414130 321 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 AL360013.1-201ENST00000419031 858 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 RPS17P17-201ENST00000419392 409 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
LIMK2P53671 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK2P53671 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 AC114982.2-201ENST00000461396 358 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.42□□□□□ -1.38
LIMK2P53671 RN7SL170P-201ENST00000487098 295 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIMK2P53671 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK2P53671 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.42□□□□□ -1.38
LIMK2P53671 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.42□□□□□ -1.38
LIMK2P53671 AC026956.1-201ENST00000558741 396 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK2P53671 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK2P53671 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 U1.41-201ENST00000617626 165 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 AC073593.1-201ENST00000624500 411 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 AC010325.3-201ENST00000641084 394 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 CASC19-274ENST00000642018 970 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 MAPK10-287ENST00000641217 3037 ntBASIC6.42□□□□□ -1.38
LIMK2P53671 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
LIMK2P53671 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK2P53671 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK2P53671 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK2P53671 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK2P53671 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LIMK2P53671 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK2P53671 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK2P53671 RNA5SP485-201ENST00000365053 119 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK2P53671 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.41□□□□□ -1.38
LIMK2P53671 AL391419.1-201ENST00000398901 1275 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 MIR1275-201ENST00000408770 80 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 UBE2V1P14-201ENST00000415815 558 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 AL354893.1-201ENST00000433735 348 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK2P53671 AL022237.1-201ENST00000446663 358 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AC093166.3-201ENST00000448785 303 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AC104339.1-201ENST00000465478 348 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AC117500.1-201ENST00000497352 755 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC092718.4-201ENST00000566639 716 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC016590.3-201ENST00000611171 753 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AL162377.2-201ENST00000624532 337 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 AC007114.2-201ENST00000576014 4281 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 AC092646.2-201ENST00000431242 2095 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK2P53671 AL662795.2-201ENST00000624252 3706 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK2P53671 AP001157.1-201ENST00000550837 2339 ntBASIC6.41□□□□□ -1.38
LIMK2P53671 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
LIMK2P53671 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK2P53671 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK2P53671 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK2P53671 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms