Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 AL117339.4-201ENST00000608335 7063 ntBASIC6.25□□□□□ -1.41
CD40P25942 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 RNA5SP429-201ENST00000363688 109 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC019178.1-201ENST00000392337 440 ntBASIC6.25□□□□□ -1.41
CD40P25942 NACAP7-201ENST00000407371 609 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC096537.2-201ENST00000413707 714 ntBASIC6.25□□□□□ -1.41
CD40P25942 AL356320.2-201ENST00000417263 507 ntBASIC6.25□□□□□ -1.41
CD40P25942 GEMIN2P2-201ENST00000418195 715 ntBASIC6.25□□□□□ -1.41
CD40P25942 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CD40P25942 RPL23AP85-201ENST00000421838 433 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 AC005517.1-201ENST00000452091 489 ntBASIC6.25□□□□□ -1.41
CD40P25942 HSPE1P22-201ENST00000456856 327 ntBASIC6.25□□□□□ -1.41
CD40P25942 USP9YP25-201ENST00000457708 443 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC010468.1-201ENST00000461022 817 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC098583.1-201ENST00000480875 255 ntBASIC6.25□□□□□ -1.41
CD40P25942 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 AC008967.1-201ENST00000504843 163 ntBASIC6.25□□□□□ -1.41
CD40P25942 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.25□□□□□ -1.41
CD40P25942 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.25□□□□□ -1.41
CD40P25942 AC010442.1-201ENST00000515583 816 ntBASIC6.25□□□□□ -1.41
CD40P25942 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC107952.1-201ENST00000524200 376 ntBASIC6.25□□□□□ -1.41
CD40P25942 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.25□□□□□ -1.41
CD40P25942 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 EEF1B2P1-201ENST00000567221 672 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 AL365223.1-201ENST00000574864 1297 ntBASIC6.25□□□□□ -1.41
CD40P25942 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 AC096586.1-201ENST00000610267 561 ntBASIC6.25□□□□□ -1.41
CD40P25942 MIR6774-201ENST00000614651 70 ntBASIC6.25□□□□□ -1.41
CD40P25942 AC073488.2-201ENST00000631903 751 ntBASIC6.25□□□□□ -1.41
CD40P25942 MIR3974-201ENST00000637126 96 ntBASIC6.25□□□□□ -1.41
CD40P25942 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CD40P25942 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD40P25942 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.25□□□□□ -1.41
CD40P25942 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.25□□□□□ -1.41
CD40P25942 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
CD40P25942 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CD40P25942 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 AC127502.2-201ENST00000602663 2351 ntBASIC6.24□□□□□ -1.41
CD40P25942 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.24□□□□□ -1.41
CD40P25942 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.24□□□□□ -1.41
CD40P25942 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.24□□□□□ -1.41
CD40P25942 MTND5P23-201ENST00000430812 1655 ntBASIC6.24□□□□□ -1.41
CD40P25942 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.24□□□□□ -1.41
CD40P25942 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CD40P25942 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CD40P25942 SNORA70.5-201ENST00000365519 135 ntBASIC6.24□□□□□ -1.41
CD40P25942 RNU6-244P-201ENST00000391028 104 ntBASIC6.24□□□□□ -1.41
CD40P25942 AL445238.1-204ENST00000400311 463 ntBASIC6.24□□□□□ -1.41
CD40P25942 SKINT1L-201ENST00000401057 817 ntBASIC6.24□□□□□ -1.41
CD40P25942 CNN3P1-201ENST00000401596 935 ntBASIC6.24□□□□□ -1.41
CD40P25942 MTCO1P56-201ENST00000401674 224 ntBASIC6.24□□□□□ -1.41
CD40P25942 AL355375.1-201ENST00000405686 392 ntBASIC6.24□□□□□ -1.41
CD40P25942 MRPL32P1-201ENST00000406301 247 ntBASIC6.24□□□□□ -1.41
CD40P25942 FCF1P5-201ENST00000406490 482 ntBASIC6.24□□□□□ -1.41
CD40P25942 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.24□□□□□ -1.41
CD40P25942 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.24□□□□□ -1.41
CD40P25942 RPL5P6-201ENST00000425640 886 ntBASIC6.24□□□□□ -1.41
CD40P25942 AC021876.1-201ENST00000425959 359 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms