Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL8A2P25067 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
COL8A2P25067 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 AL136984.1-201ENST00000607611 1893 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 RNA5SP433-201ENST00000364491 114 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.33□□□□□ -1.56
COL8A2P25067 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 RPSAP65-201ENST00000429660 595 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.33□□□□□ -1.56
COL8A2P25067 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 Z83838.1-202ENST00000456225 839 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.33□□□□□ -1.56
COL8A2P25067 AP002884.1-201ENST00000479691 655 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 AC092824.1-201ENST00000483524 576 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 OR4D12P-201ENST00000509361 911 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.33□□□□□ -1.56
COL8A2P25067 IGKV1D-22-201ENST00000518953 324 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 AC084337.1-201ENST00000524809 686 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 AC090115.2-201ENST00000548060 883 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.33□□□□□ -1.56
COL8A2P25067 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.33□□□□□ -1.56
COL8A2P25067 AC002310.3-201ENST00000569728 723 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.33□□□□□ -1.56
COL8A2P25067 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 AC097467.4-201ENST00000605504 141 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 MIR6778-201ENST00000617912 73 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 AL117339.4-201ENST00000608335 7063 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL8A2P25067 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.33□□□□□ -1.56
COL8A2P25067 AL033543.1-201ENST00000623440 13454 ntBASIC5.33□□□□□ -1.56
COL8A2P25067 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
COL8A2P25067 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL8A2P25067 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A2P25067 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL8A2P25067 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 AL050335.1-201ENST00000396909 869 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 SNORA77.2-201ENST00000408571 112 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 MIR1282-201ENST00000408865 101 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 RPS7P14-201ENST00000426405 583 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A2P25067 AL590004.3-202ENST00000445883 451 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A2P25067 OR52I1-201ENST00000450052 1050 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 RPL5P12-201ENST00000477071 851 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 COX6B1P4-201ENST00000519826 484 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.32□□□□□ -1.56
COL8A2P25067 AL008723.3-201ENST00000608926 449 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 AC092681.3-201ENST00000609463 678 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 AL080312.2-201ENST00000613001 630 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms