Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 NACAP5-201ENST00000509863 636 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AL157831.2-201ENST00000564681 3095 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 MIR212-201ENST00000586026 110 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC068726.1-201ENST00000610993 341 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC105749.1-201ENST00000631338 2008 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC130360.2-201ENST00000533477 1556 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 MIR191-201ENST00000384873 92 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 KF459542.1-201ENST00000450908 553 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC004890.1-201ENST00000461005 181 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC138517.1-201ENST00000515724 568 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 BTG1P1-201ENST00000540396 508 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 TPRX1P1-201ENST00000557620 319 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC025283.1-201ENST00000572039 734 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC023389.2-201ENST00000580031 955 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 AC138627.1-204ENST00000641894 765 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.45□□□□□ -1.38
HLA-DPA1P20036 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DPA1P20036 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC011369.2-201ENST00000624423 1567 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC110373.1-201ENST00000505994 3505 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 RNA5SP478-201ENST00000364657 115 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 RN7SKP146-201ENST00000410242 334 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 CBX1P3-201ENST00000413296 527 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 UBE2V1P14-201ENST00000415815 558 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 FAM183DP-201ENST00000421987 399 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC092601.1-201ENST00000444526 383 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC099670.1-201ENST00000455141 783 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC044810.1-201ENST00000480271 711 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms