Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL3P19876 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.18□□□□□ -1.58
CXCL3P19876 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CXCL3P19876 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CXCL3P19876 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL3P19876 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CXCL3P19876 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CXCL3P19876 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL3P19876 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CXCL3P19876 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL3P19876 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
CXCL3P19876 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL3P19876 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CXCL3P19876 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 AC024587.1-201ENST00000505925 2157 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AC010266.2-201ENST00000564741 3255 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 U3.14-201ENST00000365363 227 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 FDPSP5-201ENST00000399474 1057 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AL445238.1-204ENST00000400311 463 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL3P19876 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL3P19876 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 AC134879.1-201ENST00000426062 394 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 RPS10P21-201ENST00000430654 475 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 NDUFB4P1-201ENST00000462398 381 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL3P19876 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL3P19876 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.17□□□□□ -1.58
CXCL3P19876 AC105420.1-201ENST00000504389 582 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL3P19876 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 OR6M2P-201ENST00000529831 871 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AP004609.2-201ENST00000532177 190 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL3P19876 AC092032.1-201ENST00000603090 165 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AL136097.3-201ENST00000611097 505 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AL031777.2-201ENST00000611953 196 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 pRNA.9-201ENST00000618609 89 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 AC022400.9-201ENST00000623633 273 ntBASIC5.17□□□□□ -1.58
CXCL3P19876 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
CXCL3P19876 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CXCL3P19876 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL3P19876 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CXCL3P19876 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL3P19876 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL3P19876 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL3P19876 AL121839.2-201ENST00000565058 6943 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL3P19876 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CXCL3P19876 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CXCL3P19876 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL3P19876 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CXCL3P19876 AC090220.1-201ENST00000593078 1699 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL3P19876 RN7SKP128-201ENST00000364270 303 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL3P19876 RNA5SP53-201ENST00000391299 120 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 RPSAP44-201ENST00000406712 884 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL3P19876 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL3P19876 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL3P19876 RPL29P7-201ENST00000440227 457 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL3P19876 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL3P19876 AL162739.1-201ENST00000450606 307 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL3P19876 RPS26P6-201ENST00000475156 348 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 AC099340.1-201ENST00000475247 599 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
CXCL3P19876 AC018475.1-201ENST00000478358 465 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL3P19876 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL3P19876 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL3P19876 SCARNA5-201ENST00000516201 276 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 SCARNA18.2-201ENST00000516882 84 ntBASIC5.16□□□□□ -1.58
CXCL3P19876 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms