Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 RN7SL654P-201ENST00000479178 292 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 RPS3AP43-201ENST00000479743 781 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 GOLGA5P1-201ENST00000507317 980 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 SNX18P25-201ENST00000510539 758 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 HMGB1P47-201ENST00000511281 589 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 RNA5SP278-201ENST00000517055 102 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC007346.2-201ENST00000564816 892 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AC025283.1-201ENST00000572039 734 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 MTATP6P3-201ENST00000581686 676 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC8.13□□□□□ -1.11
PTPRAP18433 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 RPL29P33-201ENST00000587474 316 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 PART1_2.1-201ENST00000612397 250 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 AK6-205ENST00000618980 483 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTPRAP18433 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 LINC00663-203ENST00000586885 2546 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPRAP18433 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPRAP18433 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPRAP18433 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 AC006511.2-201ENST00000388966 660 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPRAP18433 RNU6-1242P-201ENST00000391052 103 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 GSTA8P-201ENST00000404253 637 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AL355379.1-201ENST00000405542 640 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PTPRAP18433 RPL23AP18-201ENST00000416139 468 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 ANKRD54P1-201ENST00000433115 471 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AC090018.1-201ENST00000434369 367 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 MTND1P4-201ENST00000435196 415 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 NPM1P33-201ENST00000438918 872 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 AKR1D1P1-201ENST00000457236 936 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPRAP18433 MTCO1P31-201ENST00000506355 492 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AC146944.3-201ENST00000509969 371 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 MTND4LP18-201ENST00000526864 291 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AP003461.1-201ENST00000528866 78 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.12□□□□□ -1.11
PTPRAP18433 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPRAP18433 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.12□□□□□ -1.11
PTPRAP18433 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.12□□□□□ -1.11
PTPRAP18433 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 MT1CP-201ENST00000567054 174 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPRAP18433 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC8.12□□□□□ -1.11
PTPRAP18433 AL603839.4-201ENST00000624658 1005 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AC007671.2-201ENST00000637344 619 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 AC119674.1-201ENST00000641611 1210 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms