Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 AL359715.4-201ENST00000606629 1436 ntBASIC7.32□□□□□ -1.24
NID1P14543 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 ZNF192P2-201ENST00000402215 1383 ntBASIC7.32□□□□□ -1.24
NID1P14543 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.31□□□□□ -1.24
NID1P14543 PHF2P2-202ENST00000444553 2865 ntBASIC7.31□□□□□ -1.24
NID1P14543 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 MTND5P26-201ENST00000426018 1752 ntBASIC7.31□□□□□ -1.24
NID1P14543 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NID1P14543 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NID1P14543 RNU6-253P-201ENST00000384730 105 ntBASIC7.31□□□□□ -1.24
NID1P14543 MIR654-201ENST00000385199 81 ntBASIC7.31□□□□□ -1.24
NID1P14543 AC002524.1-201ENST00000411687 547 ntBASIC7.31□□□□□ -1.24
NID1P14543 RPL21P108-201ENST00000413857 481 ntBASIC7.31□□□□□ -1.24
NID1P14543 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.31□□□□□ -1.24
NID1P14543 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.31□□□□□ -1.24
NID1P14543 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 BTF3P10-201ENST00000433415 495 ntBASIC7.31□□□□□ -1.24
NID1P14543 HMGN2P24-201ENST00000433516 273 ntBASIC7.31□□□□□ -1.24
NID1P14543 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 AL592437.1-201ENST00000443781 492 ntBASIC7.31□□□□□ -1.24
NID1P14543 RPL21P33-201ENST00000444831 484 ntBASIC7.31□□□□□ -1.24
NID1P14543 MTCO1P18-201ENST00000455518 1419 ntBASIC7.31□□□□□ -1.24
NID1P14543 RPS20P24-201ENST00000457473 361 ntBASIC7.31□□□□□ -1.24
NID1P14543 NUTF2P4-201ENST00000458353 381 ntBASIC7.31□□□□□ -1.24
NID1P14543 AL672167.3-201ENST00000465951 960 ntBASIC7.31□□□□□ -1.24
NID1P14543 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 AC105910.1-201ENST00000482585 483 ntBASIC7.31□□□□□ -1.24
NID1P14543 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.31□□□□□ -1.24
NID1P14543 IGHV7-40-201ENST00000520963 296 ntBASIC7.31□□□□□ -1.24
NID1P14543 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 MTCO3P15-201ENST00000526563 574 ntBASIC7.31□□□□□ -1.24
NID1P14543 AP000445.1-201ENST00000526692 741 ntBASIC7.31□□□□□ -1.24
NID1P14543 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC7.31□□□□□ -1.24
NID1P14543 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.31□□□□□ -1.24
NID1P14543 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 AL445383.1-201ENST00000554689 874 ntBASIC7.31□□□□□ -1.24
NID1P14543 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.31□□□□□ -1.24
NID1P14543 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 BPTFP1-201ENST00000579209 492 ntBASIC7.31□□□□□ -1.24
NID1P14543 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 AC012254.4-201ENST00000588843 273 ntBASIC7.31□□□□□ -1.24
NID1P14543 AC016999.2-201ENST00000614692 556 ntBASIC7.31□□□□□ -1.24
NID1P14543 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.31□□□□□ -1.24
NID1P14543 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 AC006026.1-201ENST00000444025 1803 ntBASIC7.31□□□□□ -1.24
NID1P14543 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 AC127502.2-201ENST00000602663 2351 ntBASIC7.31□□□□□ -1.24
NID1P14543 AC016930.1-201ENST00000468766 2205 ntBASIC7.31□□□□□ -1.24
NID1P14543 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
NID1P14543 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NID1P14543 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.31□□□□□ -1.24
NID1P14543 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NID1P14543 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NID1P14543 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NID1P14543 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NID1P14543 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NID1P14543 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.3□□□□□ -1.24
NID1P14543 NXF4-202ENST00000416098 1465 ntBASIC7.3□□□□□ -1.24
NID1P14543 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms