Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RPS27P18-201ENST00000431701 247 ntBASIC10.39□□□□□ -0.75
CFTRP13569 AL390119.1-201ENST00000440329 312 ntBASIC10.39□□□□□ -0.75
CFTRP13569 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC10.39□□□□□ -0.75
CFTRP13569 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 SNORA43.3-201ENST00000517240 103 ntBASIC10.39□□□□□ -0.75
CFTRP13569 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CFTRP13569 RNU4ATAC-201ENST00000580972 127 ntBASIC10.39□□□□□ -0.75
CFTRP13569 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 AL049840.6-201ENST00000604583 345 ntBASIC10.39□□□□□ -0.75
CFTRP13569 FAM27E4-201ENST00000605259 342 ntBASIC10.39□□□□□ -0.75
CFTRP13569 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC10.39□□□□□ -0.75
CFTRP13569 METTL15-211ENST00000634762 718 ntTSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 AP003972.1-201ENST00000625192 5446 ntBASIC10.39□□□□□ -0.75
CFTRP13569 AC105235.1-201ENST00000623208 1816 ntBASIC10.39□□□□□ -0.75
CFTRP13569 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 BIN2P1-201ENST00000504996 1530 ntBASIC10.39□□□□□ -0.75
CFTRP13569 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC10.38□□□□□ -0.75
CFTRP13569 UBE2V1P14-201ENST00000415815 558 ntBASIC10.38□□□□□ -0.75
CFTRP13569 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC10.38□□□□□ -0.75
CFTRP13569 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.38□□□□□ -0.75
CFTRP13569 RPS7P3-201ENST00000443360 580 ntBASIC10.38□□□□□ -0.75
CFTRP13569 RNA5SP92-201ENST00000516437 110 ntBASIC10.38□□□□□ -0.75
CFTRP13569 IGLV3-30-201ENST00000524362 298 ntBASIC10.38□□□□□ -0.75
CFTRP13569 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CFTRP13569 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CFTRP13569 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CFTRP13569 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 RN7SKP273-201ENST00000411392 314 ntBASIC10.37□□□□□ -0.75
CFTRP13569 MRPL53P1-201ENST00000414323 319 ntBASIC10.37□□□□□ -0.75
CFTRP13569 OR6E1P-201ENST00000414424 923 ntBASIC10.37□□□□□ -0.75
CFTRP13569 RPS3AP15-201ENST00000483874 781 ntBASIC10.37□□□□□ -0.75
CFTRP13569 AP000662.1-201ENST00000530952 487 ntBASIC10.37□□□□□ -0.75
CFTRP13569 APPL2-203ENST00000546731 684 ntTSL 2 BASIC10.37□□□□□ -0.75
CFTRP13569 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CFTRP13569 AC119403.2-201ENST00000590960 598 ntBASIC10.37□□□□□ -0.75
CFTRP13569 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC10.37□□□□□ -0.75
CFTRP13569 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC10.37□□□□□ -0.75
CFTRP13569 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CFTRP13569 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC10.37□□□□□ -0.75
CFTRP13569 AL359976.1-201ENST00000418655 3528 ntBASIC10.37□□□□□ -0.75
CFTRP13569 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC10.37□□□□□ -0.75
CFTRP13569 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC10.37□□□□□ -0.75
CFTRP13569 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 CD46-209ENST00000367047 3089 ntTSL 5 BASIC10.37□□□□□ -0.75
CFTRP13569 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CFTRP13569 AC025470.1-201ENST00000510053 2032 ntBASIC10.37□□□□□ -0.75
CFTRP13569 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC10.37□□□□□ -0.75
CFTRP13569 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CFTRP13569 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 MGAT2P1-201ENST00000449718 797 ntBASIC10.36□□□□□ -0.75
CFTRP13569 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 RPL35AP19-201ENST00000469425 329 ntBASIC10.36□□□□□ -0.75
CFTRP13569 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 AC024558.1-201ENST00000505008 528 ntBASIC10.36□□□□□ -0.75
CFTRP13569 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.36□□□□□ -0.75
CFTRP13569 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC10.36□□□□□ -0.75
CFTRP13569 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CFTRP13569 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
CFTRP13569 HDAC1P2-201ENST00000453661 1398 ntBASIC10.36□□□□□ -0.75
CFTRP13569 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC10.36□□□□□ -0.75
CFTRP13569 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
CFTRP13569 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CFTRP13569 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC10.36□□□□□ -0.75
CFTRP13569 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC10.36□□□□□ -0.75
CFTRP13569 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC10.36□□□□□ -0.75
CFTRP13569 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CFTRP13569 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms