Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 AC005725.1-201ENST00000577346 2607 ntBASIC6.48□□□□□ -1.37
CD48P09326 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.48□□□□□ -1.37
CD48P09326 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 CASC19-246ENST00000641625 1606 ntBASIC6.48□□□□□ -1.37
CD48P09326 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CD48P09326 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 RNA5SP485-201ENST00000365053 119 ntBASIC6.48□□□□□ -1.37
CD48P09326 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 YWHAZP4-201ENST00000392459 708 ntBASIC6.48□□□□□ -1.37
CD48P09326 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.48□□□□□ -1.37
CD48P09326 AL360271.1-201ENST00000395679 510 ntBASIC6.48□□□□□ -1.37
CD48P09326 RN7SKP121-201ENST00000410842 305 ntBASIC6.48□□□□□ -1.37
CD48P09326 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.48□□□□□ -1.37
CD48P09326 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.48□□□□□ -1.37
CD48P09326 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CD48P09326 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.48□□□□□ -1.37
CD48P09326 EMC3-AS1-205ENST00000438698 534 ntBASIC6.48□□□□□ -1.37
CD48P09326 AC064862.5-201ENST00000440618 334 ntBASIC6.48□□□□□ -1.37
CD48P09326 RPL12P49-201ENST00000441100 121 ntBASIC6.48□□□□□ -1.37
CD48P09326 MORF4-201ENST00000447135 971 ntBASIC6.48□□□□□ -1.37
CD48P09326 AL451063.1-201ENST00000450164 1133 ntBASIC6.48□□□□□ -1.37
CD48P09326 AL133351.3-201ENST00000454998 193 ntBASIC6.48□□□□□ -1.37
CD48P09326 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 RN7SL393P-201ENST00000463588 296 ntBASIC6.48□□□□□ -1.37
CD48P09326 OR4D12P-201ENST00000509361 911 ntBASIC6.48□□□□□ -1.37
CD48P09326 AC010343.2-201ENST00000510162 224 ntBASIC6.48□□□□□ -1.37
CD48P09326 AC138517.1-201ENST00000515724 568 ntBASIC6.48□□□□□ -1.37
CD48P09326 RNA5SP400-201ENST00000517155 111 ntBASIC6.48□□□□□ -1.37
CD48P09326 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.48□□□□□ -1.37
CD48P09326 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.48□□□□□ -1.37
CD48P09326 AC092865.1-201ENST00000544395 1023 ntBASIC6.48□□□□□ -1.37
CD48P09326 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.48□□□□□ -1.37
CD48P09326 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.48□□□□□ -1.37
CD48P09326 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.48□□□□□ -1.37
CD48P09326 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.48□□□□□ -1.37
CD48P09326 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.48□□□□□ -1.37
CD48P09326 AC022106.1-201ENST00000612834 766 ntBASIC6.48□□□□□ -1.37
CD48P09326 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.48□□□□□ -1.37
CD48P09326 SHQ1P1-201ENST00000437111 1544 ntBASIC6.48□□□□□ -1.37
CD48P09326 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 USP9YP3-201ENST00000434481 1766 ntBASIC6.48□□□□□ -1.37
CD48P09326 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD48P09326 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.48□□□□□ -1.37
CD48P09326 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.48□□□□□ -1.37
CD48P09326 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.47□□□□□ -1.37
CD48P09326 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.47□□□□□ -1.37
CD48P09326 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.47□□□□□ -1.37
CD48P09326 AC079753.1-201ENST00000623243 3868 ntBASIC6.47□□□□□ -1.37
CD48P09326 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CD48P09326 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.47□□□□□ -1.37
CD48P09326 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 AL360013.1-201ENST00000419031 858 ntBASIC6.47□□□□□ -1.37
CD48P09326 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.47□□□□□ -1.37
CD48P09326 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.47□□□□□ -1.37
CD48P09326 AC016908.1-201ENST00000442571 1219 ntBASIC6.47□□□□□ -1.37
CD48P09326 CXCR2P1-202ENST00000443392 1074 ntBASIC6.47□□□□□ -1.37
CD48P09326 AC234771.2-201ENST00000445718 597 ntBASIC6.47□□□□□ -1.37
CD48P09326 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.47□□□□□ -1.37
CD48P09326 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.47□□□□□ -1.37
CD48P09326 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.47□□□□□ -1.37
CD48P09326 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.47□□□□□ -1.37
CD48P09326 AC098799.1-201ENST00000504752 800 ntBASIC6.47□□□□□ -1.37
CD48P09326 NACAP5-201ENST00000509863 636 ntBASIC6.47□□□□□ -1.37
CD48P09326 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.47□□□□□ -1.37
CD48P09326 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.47□□□□□ -1.37
CD48P09326 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.47□□□□□ -1.37
CD48P09326 AC003992.1-201ENST00000635364 557 ntBASIC6.47□□□□□ -1.37
CD48P09326 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.47□□□□□ -1.37
CD48P09326 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD48P09326 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CD48P09326 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.47□□□□□ -1.37
CD48P09326 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms