Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
COL5A2P05997 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.09□□□□□ -1.11
COL5A2P05997 AC095057.1-201ENST00000507583 168 ntBASIC8.09□□□□□ -1.11
COL5A2P05997 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.09□□□□□ -1.11
COL5A2P05997 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.09□□□□□ -1.11
COL5A2P05997 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL5A2P05997 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.09□□□□□ -1.11
COL5A2P05997 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL5A2P05997 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL5A2P05997 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.09□□□□□ -1.11
COL5A2P05997 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.09□□□□□ -1.11
COL5A2P05997 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL5A2P05997 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.12
COL5A2P05997 AC110373.1-201ENST00000505994 3505 ntBASIC8.09□□□□□ -1.12
COL5A2P05997 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
COL5A2P05997 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
COL5A2P05997 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
COL5A2P05997 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.08□□□□□ -1.12
COL5A2P05997 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 U3.7-201ENST00000363668 216 ntBASIC8.08□□□□□ -1.12
COL5A2P05997 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.08□□□□□ -1.12
COL5A2P05997 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.08□□□□□ -1.12
COL5A2P05997 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.08□□□□□ -1.12
COL5A2P05997 AC093270.2-201ENST00000486157 792 ntBASIC8.08□□□□□ -1.12
COL5A2P05997 AC024587.1-201ENST00000505925 2157 ntBASIC8.08□□□□□ -1.12
COL5A2P05997 AC115837.1-201ENST00000517662 1001 ntBASIC8.08□□□□□ -1.12
COL5A2P05997 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.08□□□□□ -1.12
COL5A2P05997 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.08□□□□□ -1.12
COL5A2P05997 HMGN2P36-201ENST00000529541 409 ntBASIC8.08□□□□□ -1.12
COL5A2P05997 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.08□□□□□ -1.12
COL5A2P05997 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.08□□□□□ -1.12
COL5A2P05997 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 AL136295.6-201ENST00000610486 658 ntBASIC8.08□□□□□ -1.12
COL5A2P05997 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
COL5A2P05997 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
COL5A2P05997 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
COL5A2P05997 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
COL5A2P05997 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
COL5A2P05997 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
COL5A2P05997 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.08□□□□□ -1.12
COL5A2P05997 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
COL5A2P05997 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.08□□□□□ -1.12
COL5A2P05997 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.07□□□□□ -1.12
COL5A2P05997 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 AC016739.1-201ENST00000405359 345 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 RPS15AP30-201ENST00000420976 390 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.07□□□□□ -1.12
COL5A2P05997 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.07□□□□□ -1.12
COL5A2P05997 AC023245.1-201ENST00000468501 517 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 SIAH1P1-201ENST00000479411 923 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 AC006499.3-201ENST00000506077 748 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.07□□□□□ -1.12
COL5A2P05997 IGHVIII-13-1-201ENST00000517613 291 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.07□□□□□ -1.12
COL5A2P05997 MIR3189-201ENST00000578735 73 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 FO393422.1-201ENST00000603908 708 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 RN7SL544P-201ENST00000617232 284 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 RN7SL763P-201ENST00000620922 284 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 TSHZ2-205ENST00000626626 670 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 AC004808.2-201ENST00000627965 773 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.07□□□□□ -1.12
COL5A2P05997 AC008124.1-201ENST00000609803 9730 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.07□□□□□ -1.12
COL5A2P05997 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.07□□□□□ -1.12
COL5A2P05997 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
COL5A2P05997 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
COL5A2P05997 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
COL5A2P05997 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.07□□□□□ -1.12
COL5A2P05997 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.07□□□□□ -1.12
COL5A2P05997 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
COL5A2P05997 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.07□□□□□ -1.12
COL5A2P05997 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL5A2P05997 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL5A2P05997 RN7SKP77-201ENST00000363261 353 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 RNA5SP394-201ENST00000364216 119 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.06□□□□□ -1.12
COL5A2P05997 AK4P4-201ENST00000419465 646 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.06□□□□□ -1.12
COL5A2P05997 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.06□□□□□ -1.12
COL5A2P05997 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.06□□□□□ -1.12
COL5A2P05997 AC093166.4-201ENST00000457867 318 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 PFN1P6-201ENST00000476786 399 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 AC114728.1-201ENST00000488289 483 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 AC108693.1-201ENST00000496068 432 ntBASIC8.06□□□□□ -1.12
COL5A2P05997 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.06□□□□□ -1.12
COL5A2P05997 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.06□□□□□ -1.12
COL5A2P05997 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms