Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.93□□□□□ -1.46
UPK1AO00322 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UPK1AO00322 AL121977.1-201ENST00000401636 979 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.93□□□□□ -1.46
UPK1AO00322 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 GTF3AP6-201ENST00000432585 986 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 RPEP4-201ENST00000437636 602 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 GTF2IP14-201ENST00000441415 586 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.93□□□□□ -1.46
UPK1AO00322 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.93□□□□□ -1.46
UPK1AO00322 RN7SL393P-201ENST00000463588 296 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 AC113191.1-201ENST00000517759 403 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.93□□□□□ -1.46
UPK1AO00322 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.93□□□□□ -1.46
UPK1AO00322 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.93□□□□□ -1.46
UPK1AO00322 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UPK1AO00322 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.93□□□□□ -1.46
UPK1AO00322 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UPK1AO00322 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.93□□□□□ -1.46
UPK1AO00322 AC025283.1-201ENST00000572039 734 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.93□□□□□ -1.46
UPK1AO00322 MIR212-201ENST00000586026 110 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 AC009237.12-201ENST00000604755 742 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 AC093388.1-201ENST00000609166 430 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 GAPDHP41-201ENST00000613707 975 ntBASIC5.93□□□□□ -1.46
UPK1AO00322 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.93□□□□□ -1.46
UPK1AO00322 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.93□□□□□ -1.46
UPK1AO00322 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
UPK1AO00322 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.92□□□□□ -1.46
UPK1AO00322 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 AL136984.1-201ENST00000607611 1893 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AC010329.1-201ENST00000593903 8328 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
UPK1AO00322 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
UPK1AO00322 MSL3P1-202ENST00000440028 1468 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
UPK1AO00322 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 AC078880.4-201ENST00000617627 1749 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.92□□□□□ -1.46
UPK1AO00322 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.92□□□□□ -1.46
UPK1AO00322 RN7SKP151-201ENST00000410230 316 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
UPK1AO00322 RPL21P50-201ENST00000417698 477 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AL390879.1-201ENST00000439143 386 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 RN7SL714P-201ENST00000487050 298 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.92□□□□□ -1.46
UPK1AO00322 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.92□□□□□ -1.46
UPK1AO00322 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.92□□□□□ -1.46
UPK1AO00322 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.92□□□□□ -1.46
UPK1AO00322 IGHV4-55-201ENST00000520889 368 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 AC009729.1-201ENST00000548873 1133 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.92□□□□□ -1.46
UPK1AO00322 MIR3157-201ENST00000578688 85 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AC005332.4-201ENST00000592752 579 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AL589863.1-201ENST00000595383 631 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.92□□□□□ -1.46
UPK1AO00322 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 AC022164.1-201ENST00000568767 2673 ntBASIC5.92□□□□□ -1.46
UPK1AO00322 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.92□□□□□ -1.46
UPK1AO00322 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPK1AO00322 AC096921.2-201ENST00000561507 1916 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 AC007114.2-201ENST00000576014 4281 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.91□□□□□ -1.46
UPK1AO00322 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UPK1AO00322 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 RNU11-6P-201ENST00000391127 133 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 RPL7P58-201ENST00000402913 758 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms