Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC008833.1-201ENST00000611633 691 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 MIR6071-201ENST00000616741 78 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 MIR6778-201ENST00000617912 73 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 LINC02495-203ENST00000636704 242 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL117339.4-201ENST00000608335 7063 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 MIR188-201ENST00000385034 86 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 YWHAZP6-201ENST00000399764 738 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL050305.1-201ENST00000399993 1230 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 PSMD10P2-201ENST00000432890 672 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 NDUFA5P1-201ENST00000433858 341 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 MTCO3P43-201ENST00000440974 771 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 TRBV8-1-201ENST00000481590 279 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC117395.1-201ENST00000487390 403 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC108103.1-201ENST00000511286 446 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 HSD3BP3-201ENST00000514706 994 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 NPIPB14P-203ENST00000532298 987 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 TOMM20P1-201ENST00000534518 427 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC008055.1-201ENST00000547032 609 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC005632.2-201ENST00000564271 828 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC007423.1-201ENST00000605009 627 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC096586.2-201ENST00000610260 441 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC018692.2-201ENST00000624130 348 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL162377.2-201ENST00000624532 337 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 AL139384.2-201ENST00000613809 3590 ntBASIC6.51□□□□□ -1.37
TBC1D3FA6NER0 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC092646.2-201ENST00000431242 2095 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AL669831.5-218ENST00000591702 1873 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms