Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL36AP51-201ENST00000487216 318 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SNORA81.2-201ENST00000516868 170 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 IGLC5-201ENST00000519670 293 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 FO082796.1-201ENST00000523795 183 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC069240.2-201ENST00000550242 609 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 C1orf186-209ENST00000603488 727 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 Z84480.1-201ENST00000605131 311 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC011840.6-201ENST00000624536 610 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC005538.2-201ENST00000623215 1864 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP001527.1-201ENST00000566440 1957 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 METTL21EP-201ENST00000298105 713 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 OR5J1P-201ENST00000313544 939 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 Y_RNA.257-201ENST00000364596 102 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SNORD65.1-201ENST00000390889 71 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 TUBB4BP7-201ENST00000406999 1234 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL359704.1-201ENST00000411586 781 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PHBP7-201ENST00000415677 814 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AKR1B1P1-201ENST00000429105 956 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MTCO1P54-201ENST00000430139 712 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PMS2P9-201ENST00000441237 515 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PMS2P11-201ENST00000451831 574 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SNX18P4-201ENST00000456554 838 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MRPS35P2-201ENST00000508242 191 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 KLHL2P1-201ENST00000508691 521 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC106794.2-201ENST00000513713 632 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RNU6-1225P-201ENST00000516336 65 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SNORA31.13-201ENST00000516624 135 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PHBP17-201ENST00000528576 541 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 YWHABP2-201ENST00000540201 713 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 VDAC2P2-201ENST00000544463 901 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC009101.2-202ENST00000564851 490 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RPS7P1-201ENST00000571702 585 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC011840.5-201ENST00000582125 771 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RN7SL468P-201ENST00000582256 294 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PDLIM1P3-201ENST00000582370 599 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC103710.3-201ENST00000608157 948 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP005137.2-201ENST00000609238 400 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL022345.3-201ENST00000611406 228 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL390240.1-201ENST00000612950 384 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms