Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL36AP51-201ENST00000487216 318 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SNORA81.2-201ENST00000516868 170 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 IGLC5-201ENST00000519670 293 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 FO082796.1-201ENST00000523795 183 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC069240.2-201ENST00000550242 609 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 C1orf186-209ENST00000603488 727 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 Z84480.1-201ENST00000605131 311 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC011840.6-201ENST00000624536 610 ntBASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS9D1Q9Y2B5 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC005538.2-201ENST00000623215 1864 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP001527.1-201ENST00000566440 1957 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 METTL21EP-201ENST00000298105 713 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 OR5J1P-201ENST00000313544 939 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 Y_RNA.257-201ENST00000364596 102 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SNORD65.1-201ENST00000390889 71 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 TUBB4BP7-201ENST00000406999 1234 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL359704.1-201ENST00000411586 781 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PHBP7-201ENST00000415677 814 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AKR1B1P1-201ENST00000429105 956 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MTCO1P54-201ENST00000430139 712 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PMS2P9-201ENST00000441237 515 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PMS2P11-201ENST00000451831 574 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SNX18P4-201ENST00000456554 838 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MRPS35P2-201ENST00000508242 191 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 KLHL2P1-201ENST00000508691 521 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC106794.2-201ENST00000513713 632 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RNU6-1225P-201ENST00000516336 65 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SNORA31.13-201ENST00000516624 135 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PHBP17-201ENST00000528576 541 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 YWHABP2-201ENST00000540201 713 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 VDAC2P2-201ENST00000544463 901 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC009101.2-202ENST00000564851 490 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RPS7P1-201ENST00000571702 585 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC011840.5-201ENST00000582125 771 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RN7SL468P-201ENST00000582256 294 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 PDLIM1P3-201ENST00000582370 599 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC103710.3-201ENST00000608157 948 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP005137.2-201ENST00000609238 400 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL022345.3-201ENST00000611406 228 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL390240.1-201ENST00000612950 384 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms