Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC107075.1-201ENST00000613695 314 ntBASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 AC040896.1-201ENST00000613819 479 ntBASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 MIR6070-201ENST00000613967 103 ntBASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 AC091834.1-201ENST00000614543 472 ntBASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HPS5Q9UPZ3 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 AC110926.1-201ENST00000412499 2825 ntBASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 AC066616.2-201ENST00000559334 1481 ntBASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 AC110998.1-201ENST00000519029 2053 ntBASIC9.4□□□□□ -0.91
HPS5Q9UPZ3 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 MR1-205ENST00000434571 7479 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC006141.1-201ENST00000581917 2170 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC023632.6-201ENST00000624338 2177 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC002524.1-201ENST00000411687 547 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 GAPDHP69-201ENST00000425504 1008 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 HSPD1P12-201ENST00000429127 1069 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 SNX18P14-201ENST00000429308 574 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 Z98752.2-201ENST00000432727 312 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 TRIM60P18-201ENST00000441518 828 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 GDI2P2-201ENST00000445131 608 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 HMGB1P48-201ENST00000446155 598 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 DPPA3P1-201ENST00000448050 469 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AL451074.1-202ENST00000453762 989 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC023245.1-201ENST00000468501 517 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 MTHFD2P4-201ENST00000515074 1025 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AP003033.2-201ENST00000528901 805 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC124947.2-202ENST00000552735 133 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 OR11J2P-201ENST00000555298 907 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC106734.1-201ENST00000568646 663 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 CYP4A44P-201ENST00000569984 154 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC005377.1-201ENST00000605126 456 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC002553.4-201ENST00000616896 331 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 BX005195.1-201ENST00000618097 1198 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AL713922.2-201ENST00000619384 716 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC010338.1-201ENST00000621823 717 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 AC009033.1-201ENST00000624279 431 ntBASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HPS5Q9UPZ3 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 HERC2P5-201ENST00000562687 3825 ntBASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 AL591848.3-201ENST00000570141 2968 ntBASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 AL355852.1-201ENST00000454081 1771 ntBASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC9.38□□□□□ -0.91
HPS5Q9UPZ3 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms