Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RNA5SP308-201ENST00000362532 115 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RN7SKP187-201ENST00000365536 330 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC092642.1-201ENST00000392417 425 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 NACAP7-201ENST00000407371 609 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC091390.2-201ENST00000432573 374 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RPEP4-201ENST00000437636 602 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 UBBP5-201ENST00000446970 266 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 CR383656.1-201ENST00000484916 377 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC117395.1-201ENST00000487390 403 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RPS26P24-201ENST00000497656 331 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 MORF4L2P1-201ENST00000503761 858 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AP001960.1-201ENST00000506494 658 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC008628.1-201ENST00000508663 265 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RN7SKP157-201ENST00000516174 282 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 MTND1P6-201ENST00000523621 946 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC005519.1-201ENST00000554490 601 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RN7SL66P-201ENST00000582099 264 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC024267.2-201ENST00000582737 417 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 BNIP3P27-201ENST00000599991 412 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RPL12P48-201ENST00000605620 304 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC034229.4-201ENST00000607861 441 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC021422.1-201ENST00000621212 473 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL356490.1-201ENST00000623079 479 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL354702.2-202ENST00000641481 890 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 RACGAP1P-201ENST00000550663 1879 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AL449283.1-201ENST00000602631 3403 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AP005139.1-201ENST00000580702 1647 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.76□□□□□ -1.33
DKK3Q9UBP4 CR383656.5-201ENST00000547616 1340 ntBASIC6.76□□□□□ -1.33
DKK3Q9UBP4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 GTF2IP4-201ENST00000453092 2054 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC127070.3-201ENST00000503695 3263 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 RPL24P4-201ENST00000326586 421 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 RNA5SP140-201ENST00000364524 92 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 SNORA7A-201ENST00000384765 139 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 MIR191-201ENST00000384873 92 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC002127.1-201ENST00000421305 225 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 SFR1P2-201ENST00000421841 730 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 GAPDHP19-201ENST00000431768 1005 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC011742.2-201ENST00000443818 352 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms