Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.36□□□□□ -1.39
VIPAS39Q9H9C1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 RNU12-2P-201ENST00000364789 156 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 RN7SKP69-201ENST00000365390 305 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AL136231.1-201ENST00000429407 730 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AL135933.1-201ENST00000498657 802 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 USP9YP2-201ENST00000504503 1000 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 USP9YP1-201ENST00000513521 1002 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC021820.1-201ENST00000525564 808 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 SETP17-201ENST00000534163 817 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC027216.1-201ENST00000577726 685 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 MIR3689C-201ENST00000581239 72 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AC016252.1-201ENST00000609721 474 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 AL355974.3-201ENST00000617383 467 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 MIR7159-201ENST00000620587 66 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 OR5AU1-204ENST00000641822 1197 ntBASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VIPAS39Q9H9C1 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 NR1H5P-201ENST00000452683 1377 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 AC004014.2-201ENST00000623718 5122 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 SNORD16-201ENST00000362803 99 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 PTCD2P2-201ENST00000415579 1095 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 AL157884.1-201ENST00000424561 454 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 ETF1P1-206ENST00000427296 984 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 RN7SL492P-201ENST00000460700 295 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 RN7SL352P-201ENST00000466002 277 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 RN7SL197P-201ENST00000466981 299 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 TPM3P3-201ENST00000521343 354 ntBASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.34□□□□□ -1.39
VIPAS39Q9H9C1 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms