Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 BUB1P1-201ENST00000603541 607 ntBASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 AC009166.2-201ENST00000624410 2833 ntBASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RTFDC1Q9BY42 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
RTFDC1Q9BY42 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 SAGE3P-201ENST00000619800 1635 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 CYCSP52-201ENST00000422857 310 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC008753.1-201ENST00000423096 284 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AL157884.1-201ENST00000424561 454 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 ATP5LP2-201ENST00000440646 311 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AL513343.1-201ENST00000451818 792 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 TPRKBP1-201ENST00000456243 481 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 RN7SL273P-201ENST00000481561 299 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 SNORD46.2-201ENST00000516021 102 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC068768.2-201ENST00000602352 343 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 OR1N1-202ENST00000619659 939 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RTFDC1Q9BY42 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 NEK2P4-201ENST00000425793 1329 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 CIR1P2-201ENST00000514821 1342 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AL512310.3-201ENST00000547023 1335 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 RNA5SP477-201ENST00000362639 119 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 RNA5SP346-201ENST00000363541 121 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AL096800.1-201ENST00000405326 893 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 RPL12P12-201ENST00000424633 501 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AC003989.1-201ENST00000434569 565 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AL353662.1-201ENST00000439099 327 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 AL049634.1-201ENST00000453770 1720 ntBASIC7.82□□□□□ -1.16
RTFDC1Q9BY42 TAAR4P-201ENST00000454843 1039 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms