Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 DTL-206ENST00000542077 4471 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 Y_RNA.62-201ENST00000362840 99 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 RNA5SP114-201ENST00000363780 113 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 Y_RNA.450-201ENST00000384198 113 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 RNU6-796P-201ENST00000391086 107 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC002524.1-201ENST00000411687 547 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 GTF2IP2-201ENST00000424290 697 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL121776.1-201ENST00000429337 372 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 OR6R1P-201ENST00000431838 940 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC112492.2-201ENST00000432774 1030 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 TRIM60P18-201ENST00000441518 828 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 MTCYBP42-201ENST00000444653 1130 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 VN1R10P-201ENST00000447106 875 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC116337.2-201ENST00000477662 156 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 HMGN1P12-201ENST00000499125 195 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 Y_RNA.675-201ENST00000516389 149 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 SEPT10P1-201ENST00000517342 1162 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 HMGB1P46-201ENST00000520062 610 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC084121.1-201ENST00000533882 835 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC008507.1-201ENST00000587506 734 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL645937.1-201ENST00000641739 1652 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 UVSSA-201ENST00000324803 4441 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 EPS15P1-202ENST00000459691 2071 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 GTF2IP1-202ENST00000614592 2047 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL365217.1-201ENST00000398578 2436 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 POC5-211ENST00000510798 1524 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 Z99496.1-201ENST00000469424 1477 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 PIEZO2-204ENST00000538948 2671 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC125238.2-201ENST00000430003 1440 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SMG1P1-202ENST00000309865 4223 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 HCG18-242ENST00000602319 3342 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 MAPK10-333ENST00000641607 2481 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AP005060.1-201ENST00000623868 3174 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 RNU6-413P-201ENST00000384115 107 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SNORA70.8-201ENST00000384231 136 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 YWHAZP4-201ENST00000392459 708 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms