Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 SAGE3P-201ENST00000619800 1635 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 AL353743.3-201ENST00000442109 1468 ntBASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.72□□□□□ -1.17
RPAP1Q9BWH6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 MTND2P12-201ENST00000417560 1252 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 AC094019.1-201ENST00000434678 472 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 AC068228.1-201ENST00000461723 211 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 LSM3P4-201ENST00000502948 309 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 IGKV3D-34-201ENST00000522638 302 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 SNORA74.4-201ENST00000607595 199 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 TCL6_3.1-201ENST00000619064 137 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 AC023245.2-201ENST00000530760 2978 ntBASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RPAP1Q9BWH6 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AC125238.2-201ENST00000430003 1440 ntBASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AC009963.3-201ENST00000458090 486 ntBASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AC091965.3-201ENST00000506236 208 ntBASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 CYCSP38-201ENST00000559840 322 ntBASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AC007448.1-201ENST00000582714 234 ntBASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AC073389.3-201ENST00000609434 935 ntBASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.71□□□□□ -1.18
RPAP1Q9BWH6 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 FAM32BP-201ENST00000344033 333 ntBASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 LCN1P2-201ENST00000372030 223 ntBASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 RNU4-64P-201ENST00000410795 131 ntBASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AC112492.2-201ENST00000432774 1030 ntBASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AP002453.1-201ENST00000492327 668 ntBASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 IGHV4-55-201ENST00000520889 368 ntBASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RPAP1Q9BWH6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 SNORD16-201ENST00000362803 99 ntBASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 AL157702.1-201ENST00000398764 426 ntBASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.69□□□□□ -1.18
RPAP1Q9BWH6 AMYP1-201ENST00000440059 1023 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms